FFCP PHASE1:Hg19::chr20:33735037..33735069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55741 | |EntrezGene=55741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15877 | |HGNC=15877 | ||
|TSSclassifier=strong | |||
|UniProt=B4E1F4 | |UniProt=B4E1F4 | ||
|association_with_transcript=71bp_to_ENST00000542871_5end | |association_with_transcript=71bp_to_ENST00000542871_5end | ||
|cluster_id=chr20:33735037..33735069,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_3_at_EDEM2_5end | |description=CAGE_peak_3_at_EDEM2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000473;9.86e-10;39!CL:0000234;9.86e-10;39!CL:0000860;1.07e-08;33!CL:0002057;1.07e-08;33!CL:0000097;9.59e-07;5 | |ontology_enrichment_celltype_v019=CL:0000473;9.86e-10;39!CL:0000234;9.86e-10;39!CL:0000860;1.07e-08;33!CL:0002057;1.07e-08;33!CL:0000097;9.59e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.10e-10,67;CL:0000839,7.98e-10,66;CL:0000766,9.28e-09,72;CL:0002194,1.72e-07,59;CL:0000576,1.72e-07,59;CL:0000040,1.72e-07,59;CL:0000559,1.72e-07,59;CL:0000763,2.30e-07,108;CL:0000049,2.30e-07,108;CL:0000473,2.35e-07,48;CL:0000234,2.35e-07,48;CL:0002009,5.68e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.95e-09,76;UBERON:0001474,1.39e-07,82;UBERON:0002390,2.32e-07,98;UBERON:0003061,2.32e-07,98;UBERON:0002405,6.02e-07,93 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.704772020479856,0,0.446961094427288,3.48935409640147,5.06599756336621,0,0.522371256399677,0.982935746006035,1.39560233594486,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0.602694528023977,2.19093027116212,1.46379839637152,0.123121058076788,0.612002073732759,0.313454721478088,0.572471974262113,0.136874425072884,0.251085279189606,0.764134057479513,0.57470412614962,0.393553906568396,0,0.383829398097213,0.154816123316076,0,0,1.84877005083394,1.47187681102573,1.13735385989937,0.880801318004542,0,0.601633342410425,0,0,0,0,0.726991193897824,1.13362783106643,0.485168122375632,0.929716147622738,0.822335776043652,2.16794459626573,47.4692447331548,48.414373534,51.316643885823,1.03423704220986,3.22742341791913,1.35426486594342,0.941211697713023,1.09162460023138,1.12361742222542,0.918251677112708,1.28371610830437,0,14.1836059080288,22.738856968866,19.6063385245039,3.48251086354301,1.70215567407342,3.11411124497787,46.7322517377542,51.6268089235999,47.7815458351257,1.81619850790011,0.736555271975129,0.316462387440884,0.633765858935825,0.212604299965044,0.209658645508376,0.22465726229299,0.901061357049038,0,0,0,0,0,0,0,0,0.800791974072025,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,3.96513985737078,0,1.58030450865046,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,1.94826728407911,1.44833593950726,0,0,0.541607727530031,0.128091319725675,1.1705341280389,0.822189523018381,1.10540007114339,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0,1.64225599384209,0.201606743224732,0.802320587350522,0.434473211648397,2.43806866313962,0,0.12786256184353,2.1686349143074,0.50133791063589,0.434539556882471,0,2.43317435151318,0.756278537312543,0.443458794925128,0.87834785693126,0.589405839739707,0.728590576585084,0,1.29818957461873,2.78607579678828,3.72282289452822,1.43094374583205,0,0.371457501329565,0.198762407366705,1.72046919021225,1.04142150482278,0,0.838998872419812,0.550236083880135,0.417989933073621,0,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.732186172644509,0,0,0.357198913136319,0.673588117878509,0.900891843866578,0,0,0.916008719652036,1.31780417436063,0,0.436094052142534,0,0.379891534993739,0.926864265692532,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0.74000264525148,0,0.67355336034844,0.653847612453835,0.151357427644931,0.576175924479999,0,1.24864030732128,0,0.597794722207204,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0,0.309977343527296,0,0.247266929278557,2.73048408581408,0.718618141816238,0,0.375355559615893,0.831192346452549,0.877955241761676,0.612975591598039,0.45071417671979,0.113432183160021,1.07633781413317,0,1.05965950579781,0.900273288253207,0.618315175430633,2.31876486041066,0.558350568994769,0.675105328965065,0.584622030967192,1.00973509697646,0.460249493211497,0.80823028409406,0.710019185033229,0.302256294682921,0.508681776931463,0.386521706326594,0,0,1.09776335516636,2.12047629314376,1.16193942869518,0.414644220061482,1.00928340350251,4.01475094983413,1.56449532329816,1.28648187638577,1.38134921352481,0.928735856063958,1.44375896333917,0.709840800239063,0.168584690078102,0.723033089650446,0.330881918197182,0,0.237270619111097,0.404493924480493,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,3.09024169590255,1.22988438543114,0.686271241194102,0.768251997860379,0,0.301586917234893,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.821860859650752,0.144366447761074,0,0.570762456703795,0,0,1.23108503043699,11.2322047266834,4.16167254408439,0,0.503946384596579,0.283550194484773,0.716468181622786,0.581267877027924,0.383382679165211,25.6184883705891,19.1945586148833,3.7319060797339,2.30591925467138,3.02981840223312,0.444485260045183,1.52795370223311,1.17217447210047,1.71072446022705,0.822619941626588,1.8020583470635,0.571652865261156,0.560655421726804,0.87192013766656,0.2933531432838,1.16344544182,0,1.690605505112,1.06375246633948,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,0,0,1.64648067356154,0.977208552881205,0,0.791951872933429,0,0.871533458600294,0.399891964728228,6.08118903205952,0.502257091432126,0,0.479249710983165,0,1.42636905040718,0.579125226670317,1.64381058040307,0.537182889719687,1.12085143993527,0.788123040807709,0.646882724578552,0.641715181398742,0.508189248444927,1.30139853857622,1.54657762555539,0.167516265334349,1.91381625495949,0.749007023947182,0,0.828831026872071,0.736148950314839,1.00034104211935,0.542530047399471,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0.601892199455438,0,2.0694614258501,0.664225598535437,0.553107505625109,0.695068915744663,0.195801157462741,0.343143423810856,0.206768026122887,0.431428401637234,0.74709290462411,0,0,1.5119514666484,0.496215615637554,0.460385919864187,0.841980283299221,0.8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| ||
|short_description=p3@EDEM2 | |short_description=p3@EDEM2 | ||
}} | }} |
Latest revision as of 19:09, 15 September 2015
Short description: | p3@EDEM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EDEM2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 71bp_to_ENST00000542871_5end |
EntrezGene: | EDEM2 |
HGNC: | 15877 |
UniProt: | B4E1F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.10e-10 | 67 |
myeloid lineage restricted progenitor cell | 7.98e-10 | 66 |
myeloid leukocyte | 9.28e-09 | 72 |
monopoietic cell | 1.72e-07 | 59 |
monocyte | 1.72e-07 | 59 |
monoblast | 1.72e-07 | 59 |
promonocyte | 1.72e-07 | 59 |
myeloid cell | 2.30e-07 | 108 |
common myeloid progenitor | 2.30e-07 | 108 |
defensive cell | 2.35e-07 | 48 |
phagocyte | 2.35e-07 | 48 |
macrophage dendritic cell progenitor | 5.68e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.95e-09 | 76 |
bone element | 1.39e-07 | 82 |
hematopoietic system | 2.32e-07 | 98 |
blood island | 2.32e-07 | 98 |
immune system | 6.02e-07 | 93 |