FFCP PHASE1:Hg19::chr17:66342954..66342969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ74 | |UniProt=B4DQ74 | ||
|association_with_transcript=66bp_to_AK298668_5end | |association_with_transcript=66bp_to_AK298668_5end | ||
|cluster_id=chr17:66342954..66342969,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_AK298668_5end | |description=CAGE_peak_1_at_AK298668_5end | ||
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|ontology_enrichment_celltype=CL:0000738!7.57e-26!140;CL:0000037!2.19e-24!172;CL:0000566!2.19e-24!172;CL:0000988!1.99e-22!182;CL:0002032!1.18e-21!165;CL:0000837!1.18e-21!165;CL:0000094!2.67e-19!8;CL:0002057!6.61e-19!42;CL:0000766!1.68e-18!76;CL:0002087!1.87e-18!119;CL:0000860!2.48e-17!45;CL:0000763!3.03e-15!112;CL:0000049!3.03e-15!112;CL:0002031!1.00e-13!124;CL:0000081!1.04e-13!11;CL:0000775!7.49e-11!3;CL:0002194!7.78e-11!63;CL:0000576!7.78e-11!63;CL:0000040!7.78e-11!63;CL:0000559!7.78e-11!63;CL:0002009!2.25e-10!65;CL:0000839!2.44e-09!70;CL:0000557!3.77e-09!71;CL:0000084!4.36e-08!25;CL:0000827!4.36e-08!25;CL:0000771!8.11e-08!2;CL:0000791!4.48e-07!18;CL:0000789!4.48e-07!18;CL:0002420!4.48e-07!18;CL:0002419!4.48e-07!18;CL:0000790!4.48e-07!18 | |ontology_enrichment_celltype=CL:0000738!7.57e-26!140;CL:0000037!2.19e-24!172;CL:0000566!2.19e-24!172;CL:0000988!1.99e-22!182;CL:0002032!1.18e-21!165;CL:0000837!1.18e-21!165;CL:0000094!2.67e-19!8;CL:0002057!6.61e-19!42;CL:0000766!1.68e-18!76;CL:0002087!1.87e-18!119;CL:0000860!2.48e-17!45;CL:0000763!3.03e-15!112;CL:0000049!3.03e-15!112;CL:0002031!1.00e-13!124;CL:0000081!1.04e-13!11;CL:0000775!7.49e-11!3;CL:0002194!7.78e-11!63;CL:0000576!7.78e-11!63;CL:0000040!7.78e-11!63;CL:0000559!7.78e-11!63;CL:0002009!2.25e-10!65;CL:0000839!2.44e-09!70;CL:0000557!3.77e-09!71;CL:0000084!4.36e-08!25;CL:0000827!4.36e-08!25;CL:0000771!8.11e-08!2;CL:0000791!4.48e-07!18;CL:0000789!4.48e-07!18;CL:0002420!4.48e-07!18;CL:0002419!4.48e-07!18;CL:0000790!4.48e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.14e-63;8!CL:0000081;2.58e-46;11!CL:0000775;1.78e-43;3!CL:0000771;9.30e-30;2!CL:0002127;9.99e-16;1!CL:0000911;9.99e-16;1!CL:0000814;9.99e-16;1 | |ontology_enrichment_celltype_v019=CL:0000094;1.14e-63;8!CL:0000081;2.58e-46;11!CL:0000775;1.78e-43;3!CL:0000771;9.30e-30;2!CL:0002127;9.99e-16;1!CL:0000911;9.99e-16;1!CL:0000814;9.99e-16;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.20e-63,8;CL:0000081,2.69e-46,11;CL:0000775,1.66e-43,3;CL:0000771,9.31e-30,2;CL:0002127,9.99e-16,1;CL:0000914,9.99e-16,1;CL:0000911,9.99e-16,1;CL:0000814,9.99e-16,1;CL:0002042,9.99e-16,1;CL:0002039,9.99e-16,1;CL:0002040,9.99e-16,1;CL:0002041,9.99e-16,1;CL:0000738,1.03e-13,136;CL:0000766,9.15e-12,72;CL:0000037,7.14e-11,168;CL:0000988,2.95e-10,177;CL:0002032,1.87e-09,161;CL:0000837,1.87e-09,161;CL:0000893,1.61e-08,2;CL:0002489,1.61e-08,2;CL:0000809,1.61e-08,2;CL:0000808,1.61e-08,2;CL:0000894,1.61e-08,2;CL:0000806,1.61e-08,2;CL:0000807,1.61e-08,2;CL:0000805,1.61e-08,2;CL:0002425,1.61e-08,2;CL:0000763,1.24e-07,108;CL:0000049,1.24e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002425;1.61e-08;2 | |ontology_enrichment_development_v019=CL:0002425;1.61e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.77e-14!102;UBERON:0003061!2.77e-14!102;UBERON:0002193!1.31e-13!112;UBERON:0002371!1.14e-07!80;UBERON:0002370!3.31e-07!4;UBERON:0005058!3.31e-07!4;UBERON:0009113!3.31e-07!4;UBERON:0003295!3.31e-07!4;UBERON:0005562!3.31e-07!4;UBERON:0002405!5.02e-07!115;UBERON:0001474!7.35e-07!86;UBERON:0000178!9.53e-07!15;UBERON:0000179!9.53e-07!15;UBERON:0000463!9.53e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.77e-14!102;UBERON:0003061!2.77e-14!102;UBERON:0002193!1.31e-13!112;UBERON:0002371!1.14e-07!80;UBERON:0002370!3.31e-07!4;UBERON:0005058!3.31e-07!4;UBERON:0009113!3.31e-07!4;UBERON:0003295!3.31e-07!4;UBERON:0005562!3.31e-07!4;UBERON:0002405!5.02e-07!115;UBERON:0001474!7.35e-07!86;UBERON:0000178!9.53e-07!15;UBERON:0000179!9.53e-07!15;UBERON:0000463!9.53e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@AK298668 | |short_description=p1@AK298668 | ||
}} | }} |
Latest revision as of 23:49, 16 September 2015
Short description: | p1@AK298668 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK298668_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 66bp_to_AK298668_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.20e-63 | 8 |
blood cell | 2.69e-46 | 11 |
neutrophil | 1.66e-43 | 3 |
eosinophil | 9.31e-30 | 2 |
innate effector T cell | 9.99e-16 | 1 |
immature NK T cell | 9.99e-16 | 1 |
effector T cell | 9.99e-16 | 1 |
mature NK T cell | 9.99e-16 | 1 |
immature NK T cell stage IV | 9.99e-16 | 1 |
immature NK T cell stage I | 9.99e-16 | 1 |
immature NK T cell stage II | 9.99e-16 | 1 |
immature NK T cell stage III | 9.99e-16 | 1 |
leukocyte | 1.03e-13 | 136 |
myeloid leukocyte | 9.15e-12 | 72 |
hematopoietic stem cell | 7.14e-11 | 168 |
hematopoietic cell | 2.95e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.87e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-09 | 161 |
thymocyte | 1.61e-08 | 2 |
double negative thymocyte | 1.61e-08 | 2 |
double-positive, alpha-beta thymocyte | 1.61e-08 | 2 |
DN4 thymocyte | 1.61e-08 | 2 |
DN1 thymic pro-T cell | 1.61e-08 | 2 |
DN2 thymocyte | 1.61e-08 | 2 |
DN3 thymocyte | 1.61e-08 | 2 |
immature single positive thymocyte | 1.61e-08 | 2 |
early T lineage precursor | 1.61e-08 | 2 |
myeloid cell | 1.24e-07 | 108 |
common myeloid progenitor | 1.24e-07 | 108 |