FFCP PHASE1:Hg19::chr11:1580162..1580181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1580162..1580181,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_at_chr11:1580162..1580181,- | |description=CAGE_peak_at_chr11:1580162..1580181,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.30e-10;3 | |ontology_enrichment_celltype_v019=CL:0000623;4.30e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.73e-10,3;CL:0000825,4.73e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.30e-10;3 | |ontology_enrichment_development_v019=UBERON:0006215;4.30e-10;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.19e-24!115;UBERON:0001049!1.23e-21!57;UBERON:0005068!1.23e-21!57;UBERON:0006241!1.23e-21!57;UBERON:0007135!1.23e-21!57;UBERON:0001017!4.82e-20!82;UBERON:0002780!2.11e-19!41;UBERON:0001890!2.11e-19!41;UBERON:0006240!2.11e-19!41;UBERON:0005743!2.47e-19!86;UBERON:0001869!6.02e-19!32;UBERON:0001893!9.82e-19!34;UBERON:0003080!1.13e-18!42;UBERON:0002020!1.37e-18!34;UBERON:0003528!1.37e-18!34;UBERON:0002791!3.50e-18!33;UBERON:0000073!1.00e-16!94;UBERON:0001016!1.00e-16!94;UBERON:0002616!1.28e-16!59;UBERON:0001950!1.41e-16!20;UBERON:0002346!1.78e-16!90;UBERON:0002619!2.09e-16!22;UBERON:0000955!4.20e-16!69;UBERON:0006238!4.20e-16!69;UBERON:0003075!4.85e-15!86;UBERON:0007284!4.85e-15!86;UBERON:0000956!6.70e-15!25;UBERON:0000203!6.70e-15!25;UBERON:0003056!9.44e-13!61;UBERON:0000924!2.69e-09!173;UBERON:0006601!2.69e-09!173;UBERON:0000033!4.01e-09!123;UBERON:0000153!5.96e-09!129;UBERON:0007811!5.96e-09!129;UBERON:0004121!2.46e-08!169;UBERON:0000025!5.03e-08!194;UBERON:0000200!3.33e-07!6;UBERON:0004111!3.52e-07!241;UBERON:0000477!6.75e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!7.19e-24!115;UBERON:0001049!1.23e-21!57;UBERON:0005068!1.23e-21!57;UBERON:0006241!1.23e-21!57;UBERON:0007135!1.23e-21!57;UBERON:0001017!4.82e-20!82;UBERON:0002780!2.11e-19!41;UBERON:0001890!2.11e-19!41;UBERON:0006240!2.11e-19!41;UBERON:0005743!2.47e-19!86;UBERON:0001869!6.02e-19!32;UBERON:0001893!9.82e-19!34;UBERON:0003080!1.13e-18!42;UBERON:0002020!1.37e-18!34;UBERON:0003528!1.37e-18!34;UBERON:0002791!3.50e-18!33;UBERON:0000073!1.00e-16!94;UBERON:0001016!1.00e-16!94;UBERON:0002616!1.28e-16!59;UBERON:0001950!1.41e-16!20;UBERON:0002346!1.78e-16!90;UBERON:0002619!2.09e-16!22;UBERON:0000955!4.20e-16!69;UBERON:0006238!4.20e-16!69;UBERON:0003075!4.85e-15!86;UBERON:0007284!4.85e-15!86;UBERON:0000956!6.70e-15!25;UBERON:0000203!6.70e-15!25;UBERON:0003056!9.44e-13!61;UBERON:0000924!2.69e-09!173;UBERON:0006601!2.69e-09!173;UBERON:0000033!4.01e-09!123;UBERON:0000153!5.96e-09!129;UBERON:0007811!5.96e-09!129;UBERON:0004121!2.46e-08!169;UBERON:0000025!5.03e-08!194;UBERON:0000200!3.33e-07!6;UBERON:0004111!3.52e-07!241;UBERON:0000477!6.75e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.55e-15;20!UBERON:0002619;6.43e-14;22!UBERON:0001869;1.18e-12;32!UBERON:0000956;3.22e-12;25!UBERON:0000203;3.22e-12;25!UBERON:0002791;4.97e-12;32!UBERON:0001893;2.04e-11;34!UBERON:0003528;2.71e-10;34!UBERON:0002020;2.71e-10;34!UBERON:0001871;1.36e-09;6!UBERON:0003112;3.44e-08;1!UBERON:0011158;3.44e-08;1!UBERON:0003128;3.44e-08;1!UBERON:0001703;3.44e-08;1!UBERON:0002241;3.44e-08;1!UBERON:0002780;4.13e-08;41!UBERON:0001890;4.13e-08;41 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.55e-15;20!UBERON:0002619;6.43e-14;22!UBERON:0001869;1.18e-12;32!UBERON:0000956;3.22e-12;25!UBERON:0000203;3.22e-12;25!UBERON:0002791;4.97e-12;32!UBERON:0001893;2.04e-11;34!UBERON:0003528;2.71e-10;34!UBERON:0002020;2.71e-10;34!UBERON:0001871;1.36e-09;6!UBERON:0003112;3.44e-08;1!UBERON:0011158;3.44e-08;1!UBERON:0003128;3.44e-08;1!UBERON:0001703;3.44e-08;1!UBERON:0002241;3.44e-08;1!UBERON:0002780;4.13e-08;41!UBERON:0001890;4.13e-08;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.13e-15,20;UBERON:0002619,7.74e-14,22;UBERON:0002791,2.93e-12,32;UBERON:0001869,2.93e-12,32;UBERON:0000956,3.78e-12,25;UBERON:0000203,3.78e-12,25;UBERON:0001017,1.20e-11,81;UBERON:0003528,1.70e-11,34;UBERON:0002020,1.70e-11,34;UBERON:0001893,1.70e-11,34;UBERON:0000073,4.55e-11,53;UBERON:0002616,4.55e-11,53;UBERON:0001049,2.13e-10,56;UBERON:0005068,2.13e-10,56;UBERON:0006241,2.13e-10,56;UBERON:0007135,2.13e-10,56;UBERON:0001016,2.86e-10,89;UBERON:0000955,5.19e-10,68;UBERON:0006238,5.19e-10,68;UBERON:0001871,1.67e-09,6;UBERON:0002780,2.15e-09,41;UBERON:0001890,2.15e-09,41;UBERON:0003080,2.15e-09,41;UBERON:0006240,2.15e-09,41;UBERON:0003112,2.02e-08,1;UBERON:0011158,2.02e-08,1;UBERON:0003128,2.02e-08,1;UBERON:0001703,2.02e-08,1;UBERON:0002241,2.02e-08,1;UBERON:0004761,2.02e-08,1;UBERON:0009617,2.02e-08,1;UBERON:0002346,1.13e-07,86;UBERON:0004121,4.92e-07,171;UBERON:0000924,4.92e-07,171;UBERON:0006601,4.92e-07,171 | |||
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| ||
|short_description=p@chr11:1580162..1580181,- | |short_description=p@chr11:1580162..1580181,- | ||
}} | }} |
Latest revision as of 20:21, 23 July 2015
Short description: | p@chr11:1580162..1580181, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1580162..1580181, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.73e-10 | 3 |
pro-NK cell | 4.73e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.13e-15 | 20 |
regional part of cerebral cortex | 7.74e-14 | 22 |
regional part of telencephalon | 2.93e-12 | 32 |
cerebral hemisphere | 2.93e-12 | 32 |
cerebral cortex | 3.78e-12 | 25 |
pallium | 3.78e-12 | 25 |
central nervous system | 1.20e-11 | 81 |
brain grey matter | 1.70e-11 | 34 |
gray matter | 1.70e-11 | 34 |
telencephalon | 1.70e-11 | 34 |
regional part of nervous system | 4.55e-11 | 53 |
regional part of brain | 4.55e-11 | 53 |
neural tube | 2.13e-10 | 56 |
neural rod | 2.13e-10 | 56 |
future spinal cord | 2.13e-10 | 56 |
neural keel | 2.13e-10 | 56 |
nervous system | 2.86e-10 | 89 |
brain | 5.19e-10 | 68 |
future brain | 5.19e-10 | 68 |
temporal lobe | 1.67e-09 | 6 |
regional part of forebrain | 2.15e-09 | 41 |
forebrain | 2.15e-09 | 41 |
anterior neural tube | 2.15e-09 | 41 |
future forebrain | 2.15e-09 | 41 |
olfactory region | 2.02e-08 | 1 |
primary subdivision of skull | 2.02e-08 | 1 |
cranium | 2.02e-08 | 1 |
neurocranium | 2.02e-08 | 1 |
chondrocranium | 2.02e-08 | 1 |
cartilaginous neurocranium | 2.02e-08 | 1 |
head paraxial mesoderm | 2.02e-08 | 1 |
neurectoderm | 1.13e-07 | 86 |
ectoderm-derived structure | 4.92e-07 | 171 |
ectoderm | 4.92e-07 | 171 |
presumptive ectoderm | 4.92e-07 | 171 |