FFCP PHASE1:Hg19::chr1:9711781..9711813,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:9711781..9711813,+
|short_description=p1@PIK3CD
|description=CAGE_peak_1_at_PIK3CD_5end
|association_with_transcript=0bp_to_ENST00000377346,ENST00000536656...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5293 | |EntrezGene=5293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8977 | |HGNC=8977 | ||
|TSSclassifier=strong | |||
|UniProt=O00329,Q5SR50,A7E2E0 | |UniProt=O00329,Q5SR50,A7E2E0 | ||
|association_with_transcript=0bp_to_ENST00000377346,ENST00000536656,NM_005026,uc001aqa.2,uc001aqb.3_5end | |||
|cluster_id=chr1:9711781..9711813,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_PIK3CD_5end | |||
|id=chr1:9711781..9711813,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.64e-59!172;CL:0000566!9.64e-59!172;CL:0002032!1.39e-54!165;CL:0000837!1.39e-54!165;CL:0000988!1.46e-54!182;CL:0000738!1.98e-54!140;CL:0002087!2.80e-45!119;CL:0002031!2.12e-44!124;CL:0000763!7.14e-30!112;CL:0000049!7.14e-30!112;CL:0000766!7.23e-26!76;CL:0000542!2.52e-22!53;CL:0000051!2.52e-22!53;CL:0000557!2.65e-22!71;CL:0000838!4.49e-22!52;CL:0000839!5.80e-21!70;CL:0002009!1.05e-20!65;CL:0002194!3.20e-20!63;CL:0000576!3.20e-20!63;CL:0000040!3.20e-20!63;CL:0000559!3.20e-20!63;CL:0002057!1.58e-19!42;CL:0000860!2.71e-16!45;CL:0000791!8.79e-12!18;CL:0000789!8.79e-12!18;CL:0002420!8.79e-12!18;CL:0002419!8.79e-12!18;CL:0000790!8.79e-12!18;CL:0000084!2.57e-11!25;CL:0000827!2.57e-11!25;CL:0000945!2.08e-10!24;CL:0000826!2.08e-10!24;CL:0000134!3.14e-10!358;CL:0002320!7.16e-09!365;CL:0000236!4.99e-08!14;CL:0000625!6.23e-08!11;CL:0000219!1.67e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.03e-15;48!CL:0002087;2.50e-15;104!CL:0000860;2.93e-15;33!CL:0002057;2.93e-15;33!CL:0000473;4.74e-15;39!CL:0000234;4.74e-15;39!CL:0000542;8.29e-15;53!CL:0000738;9.17e-14;136!CL:0000766;1.63e-13;69!CL:0000791;5.52e-13;18!CL:0000789;5.52e-13;18!CL:0002419;5.52e-13;18!CL:0000084;1.28e-12;25!CL:0000945;1.10e-11;24!CL:0000988;3.81e-11;177!CL:0000763;5.20e-11;100!CL:0000625;1.12e-08;11!CL:0000236;2.10e-08;13!CL:0000094;9.52e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.85e-69,168;CL:0002032,9.78e-65,161;CL:0000837,9.78e-65,161;CL:0000738,1.47e-64,136;CL:0000988,2.61e-64,177;CL:0002087,6.29e-55,115;CL:0002031,3.73e-53,120;CL:0000763,2.89e-36,108;CL:0000049,2.89e-36,108;CL:0000766,5.76e-32,72;CL:0000557,8.40e-28,67;CL:0002009,1.28e-26,61;CL:0000839,3.38e-26,66;CL:0002194,4.23e-26,59;CL:0000576,4.23e-26,59;CL:0000040,4.23e-26,59;CL:0000559,4.23e-26,59;CL:0000542,3.94e-25,53;CL:0000051,3.94e-25,53;CL:0000838,7.48e-25,52;CL:0000473,4.63e-24,48;CL:0000234,4.63e-24,48;CL:0000860,1.35e-21,42;CL:0002057,1.35e-21,42;CL:0000791,5.89e-13,18;CL:0000789,5.89e-13,18;CL:0002420,5.89e-13,18;CL:0002419,5.89e-13,18;CL:0000790,5.89e-13,18;CL:0000084,1.34e-12,25;CL:0000827,1.34e-12,25;CL:0000945,1.15e-11,24;CL:0000826,1.15e-11,24;CL:0000134,1.97e-10,354;CL:0002320,3.40e-09,361;CL:0000236,8.99e-09,14;CL:0000625,1.15e-08,11;CL:0000219,6.88e-08,386;CL:0000094,9.56e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.58e-16;42!CL:0000051;8.29e-15;53!CL:0000790;5.52e-13;18!CL:0000049;2.04e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!2.09e-07!51;DOID:0060083!2.09e-07!51;DOID:1240!5.86e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.84e-08,51;DOID:0060083,1.84e-08,51;DOID:1240,8.55e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-26!102;UBERON:0003061!1.26e-26!102;UBERON:0002193!5.11e-22!112;UBERON:0002371!7.21e-17!80;UBERON:0007023!1.38e-14!115;UBERON:0001474!2.78e-14!86;UBERON:0002405!4.90e-11!115;UBERON:0004765!1.75e-10!101;UBERON:0001434!1.75e-10!101;UBERON:0000178!9.30e-09!15;UBERON:0000179!9.30e-09!15;UBERON:0000463!9.30e-09!15;UBERON:0002384!3.87e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-09;15!UBERON:0000179;1.02e-09;15!UBERON:0000463;1.02e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.54e-33,98;UBERON:0003061,3.54e-33,98;UBERON:0002193,2.48e-28,108;UBERON:0002371,8.40e-22,76;UBERON:0002405,1.52e-20,93;UBERON:0001474,5.25e-18,82;UBERON:0004765,2.30e-15,90;UBERON:0007023,8.01e-15,114;UBERON:0001434,1.85e-12,100;UBERON:0000178,1.38e-09,15;UBERON:0000179,1.38e-09,15;UBERON:0000463,1.38e-09,15;UBERON:0002384,2.16e-08,371 | |||
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| ||
|short_description=p1@PIK3CD | |||
}} | }} |
Latest revision as of 00:24, 20 September 2015
Short description: | p1@PIK3CD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIK3CD_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000377346, ENST00000536656, NM_005026, uc001aqa.2, uc001aqb.3_5end |
EntrezGene: | PIK3CD |
HGNC: | 8977 |
UniProt: | O00329Q5SR50A7E2E0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.54e-33 | 98 |
blood island | 3.54e-33 | 98 |
hemolymphoid system | 2.48e-28 | 108 |
bone marrow | 8.40e-22 | 76 |
immune system | 1.52e-20 | 93 |
bone element | 5.25e-18 | 82 |
skeletal element | 2.30e-15 | 90 |
adult organism | 8.01e-15 | 114 |
skeletal system | 1.85e-12 | 100 |
blood | 1.38e-09 | 15 |
haemolymphatic fluid | 1.38e-09 | 15 |
organism substance | 1.38e-09 | 15 |
connective tissue | 2.16e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.84e-08 | 51 |
immune system cancer | 1.84e-08 | 51 |
leukemia | 8.55e-08 | 39 |