FFCP PHASE1:Hg19::chr4:14113700..14113741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000506739_5end | |association_with_transcript=56bp_to_ENST00000506739_5end | ||
|cluster_id=chr4:14113700..14113741,+ | |||
|coexpression_cluster_id=C4374 | |coexpression_cluster_id=C4374 | ||
|description=CAGE_peak_1_at_ENST00000506739_5end | |description=CAGE_peak_1_at_ENST00000506739_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!1.50e-15!75;CL:0000055!1.31e-10!180;CL:0002620!2.12e-10!23 | |ontology_enrichment_celltype=CL:0000057!1.50e-15!75;CL:0000055!1.31e-10!180;CL:0002620!2.12e-10!23 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.32e-15;6!CL:0000098;1.32e-15;6!CL:0002167;1.32e-15;6 | |ontology_enrichment_celltype_v019=CL:0000197;1.32e-15;6!CL:0000098;1.32e-15;6!CL:0002167;1.32e-15;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.30e-15,6;CL:0000098,1.30e-15,6;CL:0002167,1.30e-15,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.72e-07;1 | |ontology_enrichment_development_v019=UBERON:0005754;3.72e-07;1 | ||
|ontology_enrichment_disease=DOID:17!9.64e-07!5;DOID:450!9.64e-07!5;DOID:66!9.64e-07!5;DOID:423!9.64e-07!5;DOID:0080000!9.64e-07!5;DOID:11722!9.64e-07!5 | |ontology_enrichment_disease=DOID:17!9.64e-07!5;DOID:450!9.64e-07!5;DOID:66!9.64e-07!5;DOID:423!9.64e-07!5;DOID:0080000!9.64e-07!5;DOID:11722!9.64e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.55e-08;3!DOID:127;1.55e-08;3!DOID:3112;4.82e-07;1 | |ontology_enrichment_disease_v019=DOID:0060084;1.55e-08;3!DOID:127;1.55e-08;3!DOID:3112;4.82e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.41e-08,3;DOID:127,1.41e-08,3;DOID:3112,4.97e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.01e-08;3!UBERON:0004054;1.01e-08;3!UBERON:0007195;3.04e-07;1!UBERON:0001000;3.51e-07;1!UBERON:0005352;3.51e-07;1!UBERON:0000998;3.72e-07;1!UBERON:0006868;3.72e-07;1!UBERON:0005904;9.79e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.01e-08;3!UBERON:0004054;1.01e-08;3!UBERON:0007195;3.04e-07;1!UBERON:0001000;3.51e-07;1!UBERON:0005352;3.51e-07;1!UBERON:0000998;3.72e-07;1!UBERON:0006868;3.72e-07;1!UBERON:0005904;9.79e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.01e-08,3;UBERON:0004054,1.01e-08,3;UBERON:0007195,3.13e-07,1;UBERON:0001000,3.52e-07,1;UBERON:0005352,3.52e-07,1;UBERON:0000998,3.73e-07,1;UBERON:0006868,3.73e-07,1;UBERON:0005904,9.81e-07,4 | |||
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| ||
|short_description=p1@ENST00000506739 | |short_description=p1@ENST00000506739 | ||
}} | }} |
Latest revision as of 01:49, 30 July 2015
Short description: | p1@ENST00000506739 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000506739_5end |
Coexpression cluster: | C4374_bone_mesothelioma_Olfactory_liposarcoma_leiomyoma_Smooth_mesenchymal |
Association with transcript: | 56bp_to_ENST00000506739_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.30e-15 | 6 |
sensory epithelial cell | 1.30e-15 | 6 |
olfactory epithelial cell | 1.30e-15 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.01e-08 | 3 |
internal male genitalia | 1.01e-08 | 3 |
stroma of bone marrow | 3.13e-07 | 1 |
vas deferens | 3.52e-07 | 1 |
spermatic cord | 3.52e-07 | 1 |
seminal vesicle | 3.73e-07 | 1 |
seminal fluid secreting gland | 3.73e-07 | 1 |
duct of male reproductive system | 9.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.41e-08 | 3 |
leiomyoma | 1.41e-08 | 3 |
papillary adenocarcinoma | 4.97e-07 | 1 |