FFCP PHASE1:Hg19::chr17:59479934..59479943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:59479934..59479943,+ | |||
|description=CAGE_peak_at_chr17:59479934..59479943,+ | |description=CAGE_peak_at_chr17:59479934..59479943,+ | ||
|id=chr17:59479934..59479943,+ | |id=chr17:59479934..59479943,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002600;3.94e-34;2!CL:0002598;6.52e-34;2!CL:0002363;1.03e-09;2!CL:0002367;1.64e-09;2!CL:0002577;9.37e-07;3 | |ontology_enrichment_celltype_v019=CL:0002600;3.94e-34;2!CL:0002598;6.52e-34;2!CL:0002363;1.03e-09;2!CL:0002367;1.64e-09;2!CL:0002577;9.37e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002600,4.29e-34,2;CL:0002598,8.39e-34,2;CL:0002363,1.22e-09,2;CL:0000008,1.22e-09,2;CL:0002367,1.86e-09,2;CL:0002577,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.12e-17;1!CL:0000008;1.03e-09;2!UBERON:0007297;1.64e-09;2 | |ontology_enrichment_development_v019=UBERON:0005754;1.12e-17;1!CL:0000008;1.03e-09;2!UBERON:0007297;1.64e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-15!115;UBERON:0000481!4.40e-09!347;UBERON:0006947!6.99e-08!3;UBERON:0004054!6.99e-08!3 | |ontology_enrichment_uberon=UBERON:0007023!6.70e-15!115;UBERON:0000481!4.40e-09!347;UBERON:0006947!6.99e-08!3;UBERON:0004054!6.99e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007196;5.08e-18;15!UBERON:0001558;5.08e-18;15!UBERON:0000998;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0002185;3.25e-14;5!UBERON:0005178;6.86e-11;34!UBERON:0002224;6.86e-11;34!UBERON:0003126;1.72e-10;7!UBERON:0001005;1.72e-10;7!UBERON:0005181;9.67e-10;35!UBERON:0003566;1.03e-09;2!UBERON:0001777;1.03e-09;2!UBERON:0005969;1.64e-09;2!UBERON:0003956;1.64e-09;2!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007196;5.08e-18;15!UBERON:0001558;5.08e-18;15!UBERON:0000998;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0002185;3.25e-14;5!UBERON:0005178;6.86e-11;34!UBERON:0002224;6.86e-11;34!UBERON:0003126;1.72e-10;7!UBERON:0001005;1.72e-10;7!UBERON:0005181;9.67e-10;35!UBERON:0003566;1.03e-09;2!UBERON:0001777;1.03e-09;2!UBERON:0005969;1.64e-09;2!UBERON:0003956;1.64e-09;2!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,5.55e-18,15;UBERON:0001558,5.55e-18,15;UBERON:0000998,8.72e-18,1;UBERON:0006868,8.72e-18,1;UBERON:0002185,3.60e-14,5;UBERON:0005178,3.27e-12,34;UBERON:0002224,3.27e-12,34;UBERON:0005181,7.27e-12,35;UBERON:0003126,1.77e-10,7;UBERON:0001005,1.77e-10,7;UBERON:0003566,1.22e-09,2;UBERON:0001777,1.22e-09,2;UBERON:0005969,1.86e-09,2;UBERON:0003956,1.86e-09,2;UBERON:0000915,5.43e-08,52;UBERON:0000065,1.08e-07,54;UBERON:0006947,8.62e-07,3;UBERON:0004054,8.62e-07,3 | |||
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| ||
|short_description=p@chr17:59479934..59479943,+ | |short_description=p@chr17:59479934..59479943,+ | ||
}} | }} |
Latest revision as of 19:36, 25 July 2015
Short description: | p@chr17:59479934..59479943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:59479934..59479943, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 4.29e-34 | 2 |
bronchial smooth muscle cell | 8.39e-34 | 2 |
keratocyte | 1.22e-09 | 2 |
migratory cranial neural crest cell | 1.22e-09 | 2 |
trabecular meshwork cell | 1.86e-09 | 2 |
placental epithelial cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 5.55e-18 | 15 |
lower respiratory tract | 5.55e-18 | 15 |
seminal vesicle | 8.72e-18 | 1 |
seminal fluid secreting gland | 8.72e-18 | 1 |
bronchus | 3.60e-14 | 5 |
thoracic cavity element | 3.27e-12 | 34 |
thoracic cavity | 3.27e-12 | 34 |
thoracic segment organ | 7.27e-12 | 35 |
trachea | 1.77e-10 | 7 |
respiratory airway | 1.77e-10 | 7 |
head connective tissue | 1.22e-09 | 2 |
substantia propria of cornea | 1.22e-09 | 2 |
reticulum trabeculare | 1.86e-09 | 2 |
aqueous drainage system | 1.86e-09 | 2 |
thoracic segment of trunk | 5.43e-08 | 52 |
respiratory tract | 1.08e-07 | 54 |
male genital duct | 8.62e-07 | 3 |
internal male genitalia | 8.62e-07 | 3 |