FFCP PHASE1:Hg19::chr19:46916863..46916874,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83987 | |EntrezGene=83987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25367 | |HGNC=25367 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0W5 | |UniProt=Q9H0W5 | ||
|association_with_transcript=-22bp_to_ENST00000307522_5end | |association_with_transcript=-22bp_to_ENST00000307522_5end | ||
|cluster_id=chr19:46916863..46916874,- | |||
|description=CAGE_peak_2_at_CCDC8_5end | |description=CAGE_peak_2_at_CCDC8_5end | ||
|id=chr19:46916863..46916874,- | |id=chr19:46916863..46916874,- | ||
|ontology_enrichment_celltype=CL:0000055!1.09e-08!180 | |ontology_enrichment_celltype=CL:0000055!1.09e-08!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.70e-13!365;UBERON:0000481!1.25e-12!347;UBERON:0000468!9.58e-12!659;UBERON:0003103!2.52e-11!69;UBERON:0000922!1.12e-09!612;UBERON:0000119!2.29e-09!312;UBERON:0000924!3.76e-09!173;UBERON:0006601!3.76e-09!173;UBERON:0000483!4.07e-09!309;UBERON:0004121!3.41e-08!169;UBERON:0007100!5.63e-08!27;UBERON:0002050!6.62e-08!605;UBERON:0005423!6.62e-08!605;UBERON:0002346!1.04e-07!90;UBERON:0000062!1.18e-07!511;UBERON:0000153!1.23e-07!129;UBERON:0007811!1.23e-07!129;UBERON:0000923!1.38e-07!604;UBERON:0005291!1.38e-07!604;UBERON:0006598!1.38e-07!604;UBERON:0002532!1.38e-07!604;UBERON:0000033!2.24e-07!123;UBERON:0007023!3.16e-07!115;UBERON:0000467!6.59e-07!625;UBERON:0000480!9.16e-07!626 | |ontology_enrichment_uberon=UBERON:0000475!1.70e-13!365;UBERON:0000481!1.25e-12!347;UBERON:0000468!9.58e-12!659;UBERON:0003103!2.52e-11!69;UBERON:0000922!1.12e-09!612;UBERON:0000119!2.29e-09!312;UBERON:0000924!3.76e-09!173;UBERON:0006601!3.76e-09!173;UBERON:0000483!4.07e-09!309;UBERON:0004121!3.41e-08!169;UBERON:0007100!5.63e-08!27;UBERON:0002050!6.62e-08!605;UBERON:0005423!6.62e-08!605;UBERON:0002346!1.04e-07!90;UBERON:0000062!1.18e-07!511;UBERON:0000153!1.23e-07!129;UBERON:0007811!1.23e-07!129;UBERON:0000923!1.38e-07!604;UBERON:0005291!1.38e-07!604;UBERON:0006598!1.38e-07!604;UBERON:0002532!1.38e-07!604;UBERON:0000033!2.24e-07!123;UBERON:0007023!3.16e-07!115;UBERON:0000467!6.59e-07!625;UBERON:0000480!9.16e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.18e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;9.18e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.26e-07,68;UBERON:0000479,2.53e-07,773;UBERON:0007100,4.22e-07,27 | |||
|phase1_expression=2.90685406832891,2.35510576280081,1.55049844505568,0,2.68176656656373,0,0,0.631719873426831,0.783556884599516,1.47440361900905,6.28021051175185,1.09220686065086,1.31883489114227,1.23766352960047,2.65117900582333,0,0,0,0.487932798790507,0.492484232307152,1.22400414746552,3.13454721478088,0.85870796139317,0.684372125364421,1.75759695432724,0,0,0,0,0,0,0.919421224478927,5.4217065380085,1.47901604066715,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,4.60305222636709,1.0843174571537,0.50133791063589,1.30361867064741,0,2.43317435151318,0.945348171640679,0.665188192387692,1.58102614247627,1.37528029272598,8.37879163072847,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0.379891534993739,0.264818361626438,0.860509862246441,0.709336764396714,1.68203280042692,2.1349799145941,2.96001058100592,3.42332138939743,0.808264032418128,1.47115712802113,1.81628913173918,4.03323147135999,1.40592859100278,0.312160076830321,0,0.747243402759005,1.40921398372518,1.94247533241758,1.26405726032024,0.204154171254893,0.737005903870608,0.516628905878827,0,0.247266929278557,0,0.718618141816238,1.5150250255866,1.00094815897571,0,1.31693286264251,0.612975591598039,0.600952235626387,1.36118619792025,1.07633781413317,0.640672166455702,0.211931901159562,0.900273288253207,0.309157587715317,0.515281080091258,1.11670113798954,2.02531598689519,2.72823614451356,2.01947019395292,0.368199594569197,2.7479829659198,2.13005755509969,1.20902517873168,1.3564847384839,1.15956511897978,0.545492241181669,0.573609190778008,1.70763188581434,0.530119073285941,2.32387885739037,3.21349270547648,2.77552935963191,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,1.6462960453256,1.47008711385542,0,0,1.18157981336281,0,0,1.20097467208968,3.62175941848464,1.1240175325762,0.201057944823262,2.40729957412177,2.93227474779292,0,0,1.62302566965108,1.05667824812239,0,0,0,0,0,0,0,0,5.62403003920662,0.335964256397719,0.992425680696705,3.94057499892532,4.94077695473735,28.7537009373908,0,0,0,0,0,0.253991577168676,0,0,0,0.411309970813294,0.600686115687835,0.285826432630578,0.672786506072164,1.74384027533312,0.36669142910475,0,3.57656445851882,0,1.59562869950922,3.12022310734098,1.54324424557285,0,0.266422179016099,2.28764789853036,7.5967024754802,1.64648067356154,0.65147236858747,5.33087923113819,1.58390374586686,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,1.73737568001095,0.205476322550383,1.96967059563885,0,0,0,0,0.508189248444927,5.20559415430487,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,1.47229790062968,2.00068208423871,2.71265023699736,1.03985430765404,0.713715955188647,0.788512075169673,0.702848489956279,3.31040709700491,4.5481500811197,6.2083842775503,1.32845119707087,2.58116835958384,0.695068915744663,4.50342662164303,4.46086450954113,0,0,0,0.909382714338778,4.99306318531491,3.0239029332968,0.744323423456331,2.14846762603287,1.96462066103151,0.640695746278505,3.07024349440022,2.0911009748669,0,1.07946785661859,2.48586415438378,0.164254312027618,2.07701771673448,2.09178681227927,0,3.80962293576241,0.828728900423067,1.26295892981067,2.54927635209404,1.83574180943194,2.25599806453706,0.539107359730903,2.35304930753057,0,0.316654886678627,0,0,0.863663664408557,1.54227252690289,2.43851793789468,3.51182841698397,0.509752546090077,0.831076008928724,0.223874754722178,0,0,1.53870075069834,0.656029291399411,0,0.618246069886334,0,0,1.72279661398852,1.95018073810956,1.6068392984416,2.32009723901093,2.15668063960502,2.91656981979646,2.06754858726796,0.644521469209642,2.0302337147992,2.04543905798642,1.4245125703478,1.32227932288782,3.45942121257191,2.93509238737543,2.023155617111,0.464845549297286,0.94443704049192,0,0,1.06461206063404,0,0.18532421910392,0,0.744316738719335,0.949138274156178,0.762520775695299,1.27948895655667,0.855877976067841,0,0,2.69808686374972,3.0199073270966,3.41655966802491,0.606547444719948,0,0.421258456238981,4.38870365180631,0.487426979262569,0,2.04749867111979,1.97967604735198,1.13008116620243,0,0,0,1.15755106853338,2.62357900818653,0,1.54911749049875,0.563391205064483,1.72093622644862,1.57198465620994,0,1.41904425628239,2.74439925886963,1.64647446479951,2.27683904259429,3.49934720244983,0.673554789078584,2.68120910214315,4.3556393944529,0.753150406214233,0.86101074534246,1.68471475667626,3.54744122829341,1.83778720165568,0,0,0,0,0,0,0,0,4.05931470284398,5.77487913158015,4.16568367167754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,2.46174797895425,2.16364542780786,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,1.1253553312841,0,0,0,10.7593913655578,0,1.76352923497993,0,0,0.622079175323615,0,0,0,0.986434056369336,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0,0,3.62499787717397,0,0,0,0,0,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| ||
|short_description=p2@CCDC8 | |short_description=p2@CCDC8 | ||
}} | }} |
Latest revision as of 20:36, 18 September 2015
Short description: | p2@CCDC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC8_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000307522_5end |
EntrezGene: | CCDC8 |
HGNC: | 25367 |
UniProt: | Q9H0W5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 1.26e-07 | 68 |
tissue | 2.53e-07 | 773 |
primary circulatory organ | 4.22e-07 | 27 |