FFCP PHASE1:Hg19::chr6:7541552..7541590,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=P15924 | |UniProt=P15924 | ||
|association_with_transcript=-217bp_to_ENST00000379802_5end | |association_with_transcript=-217bp_to_ENST00000379802_5end | ||
|cluster_id=chr6:7541552..7541590,+ | |||
|description=CAGE_peak_4_at_DSP_5end | |description=CAGE_peak_4_at_DSP_5end | ||
|id=chr6:7541552..7541590,+ | |id=chr6:7541552..7541590,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.50e-13!254;CL:0000223!1.14e-09!59;CL:0002076!7.71e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.50e-13!254;CL:0000223!1.14e-09!59;CL:0002076!7.71e-07!43 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.79e-09,253;CL:0000223,2.81e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.49e-07;13!UBERON:0004161;4.75e-07;11 | |ontology_enrichment_development_v019=UBERON:0009497;2.49e-07;13!UBERON:0004161;4.75e-07;11 | ||
|ontology_enrichment_disease=DOID:305!4.61e-08!106 | |ontology_enrichment_disease=DOID:305!4.61e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!8.03e-16!365;UBERON:0000468!1.25e-11!659;UBERON:0009569!1.31e-11!113;UBERON:0000481!4.13e-09!347;UBERON:0000466!4.47e-09!126;UBERON:0004119!5.22e-09!169;UBERON:0000925!5.22e-09!169;UBERON:0006595!5.22e-09!169;UBERON:0002417!6.05e-08!61;UBERON:0000916!6.05e-08!61;UBERON:0001007!7.51e-08!155;UBERON:0001555!7.51e-08!155;UBERON:0007026!7.51e-08!155;UBERON:0000062!1.22e-07!511;UBERON:0000467!3.30e-07!625;UBERON:0000480!4.79e-07!626;UBERON:0002100!5.41e-07!216;UBERON:0000310!9.47e-07!10 | |ontology_enrichment_uberon=UBERON:0000475!8.03e-16!365;UBERON:0000468!1.25e-11!659;UBERON:0009569!1.31e-11!113;UBERON:0000481!4.13e-09!347;UBERON:0000466!4.47e-09!126;UBERON:0004119!5.22e-09!169;UBERON:0000925!5.22e-09!169;UBERON:0006595!5.22e-09!169;UBERON:0002417!6.05e-08!61;UBERON:0000916!6.05e-08!61;UBERON:0001007!7.51e-08!155;UBERON:0001555!7.51e-08!155;UBERON:0007026!7.51e-08!155;UBERON:0000062!1.22e-07!511;UBERON:0000467!3.30e-07!625;UBERON:0000480!4.79e-07!626;UBERON:0002100!5.41e-07!216;UBERON:0000310!9.47e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;6.77e-08;10!UBERON:0001443;7.85e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000310;6.77e-08;10!UBERON:0001443;7.85e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,9.12e-11,112;UBERON:0002417,5.15e-08,60;UBERON:0000916,5.15e-08,60;UBERON:0000310,6.10e-08,10;UBERON:0004119,4.39e-07,160;UBERON:0000925,4.39e-07,160;UBERON:0006595,4.39e-07,160;UBERON:0001443,7.15e-07,11 | |||
|phase1_expression=14.8976271001856,5.99481466894753,8.3163098416623,5.00366491765652,4.02264984984559,3.48935409640147,0,0.631719873426831,0.261185628199839,1.47440361900905,4.18680700783456,0.436882744260345,0,0.247532705920093,0,1.34465029290355,0.602694528023977,1.46062018077475,0,0,0,0,1.71741592278634,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0.919421224478927,2.10844143144775,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,1.32348744029695,1.77383517970051,1.58102614247627,2.29213382120997,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06729878806013,1.00416183829401,3.62546385398232,4.56163263431108,6.83373761134875,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,3.48875241714027,9.44246708221105,1.77282716330412,4.50191214764944,0,0.354668382198357,3.36406560085384,4.2699598291882,5.67335361359468,0.622422070799533,0.404132016209064,0,4.54072282934794,6.33793516927999,0,0.936480230490962,0,0,0.117434498643765,0,0,0,0.61417158655884,0,1.18800285728205,2.71993622206413,0,0,0,0,0,3.95079858792754,6.12975591598039,6.00952235626387,0.453728732640084,4.84352016359927,3.20336083227851,1.27159140695737,6.00182192168805,2.78241828943785,6.69865404118636,2.41951913231067,2.02531598689519,2.43592512902997,6.81571190459109,4.23429533754577,5.81925804547723,4.61512470271599,2.61955455391865,2.88253006927829,1.54608682530637,3.00020732649918,2.29443676311203,2.19552671033272,2.25300606146525,4.29917588617218,5.80501908086074,3.02785021050754,1.45990943630332,0,3.21620469096443,0,2.78620756819187,2.88751792667834,0.709840800239063,0,0.241011029883482,0.220587945464788,0.435758888184812,0.474541238222193,0.539325232640658,0.588664395376038,0,0,4.20725321410337,0.8231480226628,0,1.26755034821831,6.87979051674338,10.6342183202653,0,10.0850519605353,1.71567810298526,3.95101027471052,2.24803506515239,0.603173834469785,7.12931027720678,0,0,0,1.73895607462615,12.2105042005255,4.04226053731007,1.38895653772983,5.89787871927255,12.6432703673484,6.86788929675898,0,0.234004265139238,0.148631162288728,3.74935335947108,1.00789276919316,0.992425680696705,0.716468181622786,0.581267877027924,0,0,0,0.414656231081544,0,0,0,0.381988425558278,0,0,0,0,0.571652865261156,3.1396703616701,1.30788020649984,4.9870034358246,3.74887975697556,0,0,8.51001973071586,3.12022310734098,0,0,0.532844358032199,0,0,0,0,0.355391948742546,0,3.31583314765545,3.48613383440118,1.99945982364114,0,0,0,35.4644786127542,21.8237678084816,2.85273810081437,3.32997005335432,1.2328579353023,2.86497541183833,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,8.52680532276309,3.21172179834891,9.77754973210395,4.91993942969395,7.52365249319297,6.82222512167955,0,21.255219153134,4.97796755062599,0,0.587403472388222,2.05886054286514,0,0,0,0,0,0.30239029332968,16.1270075082205,23.6331438863616,3.36792113319688,6.79137491055215,9.21073048320066,14.6377068240683,1.48418066444991,0.616838775210622,3.01854933032316,0.328508624055237,1.03850885836724,0.813472649219715,17.7663390899685,3.00759705454927,0.368323955743585,0,0,0,3.60959690325929,4.92898157468254,4.70609861506113,0,3.69430701125065,0,0.170093705276516,3.67057057373637,4.62681758070868,2.70946437543853,1.50506932156456,0.509752546090077,0.831076008928724,0.671624264166535,0,0,1.28225062558195,0.656029291399411,4.88067591996455,5.77029665227245,0,0.082509499920588,1.14853107599234,1.95018073810956,0,0.870036464629098,0,0.307007349452259,0.413509717453592,0.107420244868274,0.290033387828457,0.681813019328807,1.86967274858148,6.94196644516108,8.26417289669956,9.06050258711547,7.28336022159959,0.929691098594572,2.20368642781448,0.6970372701606,0,3.19383618190213,0,1.11194531462352,3.2918723950658,1.86079184679834,3.79655309662471,0.38126038784765,0,0,0.318203247925937,0,0,0,0.117812402345686,2.02182481573316,0,0,0,1.21856744815642,0,0.272999822815972,0,0,1.65409603063837,0.66343897524122,3.5076070820301,0,0.655894752046633,0.811641507850816,0,0.563391205064483,0.430234056612155,0.196498082026242,1.78335525740625,0,0,0.329294892959902,0,0,1.05844323998063,2.68120910214315,0,7.06078505825844,0.43050537267123,3.36942951335251,1.33029046061003,4.59446800413919,0,0,0,0,0,0,0,0,9.72099047260006,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.73254089635947,0,0,0.284136146806413,1.90995587790152,0.296964680832639,1.53580351049616,1.9882952955326,0.984685914873589,0.333926115068718,0,0.211125408127993,0.19924798825107,1.10513566212459,109.842678064464,2.24991101504741,0,14.9299002077668,1.61763032065188,2.68531762013414,0,0.887790650732402,0,16.6705485216955,0.969332746095218,0.463840490809256,1.99613798001194,17.1882322316254,5.94727999974131,1.44999915086959,0.1137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| ||
|short_description=p4@DSP | |short_description=p4@DSP | ||
}} | }} |
Latest revision as of 18:44, 19 September 2015
Short description: | p4@DSP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DSP_5end |
Coexpression cluster: | NA |
Association with transcript: | -217bp_to_ENST00000379802_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 3.79e-09 | 253 |
endodermal cell | 2.81e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 9.12e-11 | 112 |
abdominal segment of trunk | 5.15e-08 | 60 |
abdomen | 5.15e-08 | 60 |
breast | 6.10e-08 | 10 |
endoderm-derived structure | 4.39e-07 | 160 |
endoderm | 4.39e-07 | 160 |
presumptive endoderm | 4.39e-07 | 160 |
chest | 7.15e-07 | 11 |