FFCP PHASE1:Hg19::chr11:76917955..76917963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:76917955..76917963,+ | |||
|description=CAGE_peak_at_chr11:76917955..76917963,+ | |description=CAGE_peak_at_chr11:76917955..76917963,+ | ||
|id=chr11:76917955..76917963,+ | |id=chr11:76917955..76917963,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.56e-28!42;CL:0000860!4.55e-26!45;CL:0000839!1.89e-24!70;CL:0000557!2.22e-24!71;CL:0002009!6.01e-23!65;CL:0000766!2.25e-22!76;CL:0002194!1.85e-21!63;CL:0000576!1.85e-21!63;CL:0000040!1.85e-21!63;CL:0000559!1.85e-21!63;CL:0000763!4.27e-19!112;CL:0000049!4.27e-19!112;CL:0002031!1.77e-13!124;CL:0000738!3.61e-13!140;CL:0002032!1.73e-11!165;CL:0000837!1.73e-11!165;CL:0000037!3.17e-11!172;CL:0000566!3.17e-11!172;CL:0000988!1.64e-09!182;CL:0002087!1.86e-09!119 | |ontology_enrichment_celltype=CL:0002057!9.56e-28!42;CL:0000860!4.55e-26!45;CL:0000839!1.89e-24!70;CL:0000557!2.22e-24!71;CL:0002009!6.01e-23!65;CL:0000766!2.25e-22!76;CL:0002194!1.85e-21!63;CL:0000576!1.85e-21!63;CL:0000040!1.85e-21!63;CL:0000559!1.85e-21!63;CL:0000763!4.27e-19!112;CL:0000049!4.27e-19!112;CL:0002031!1.77e-13!124;CL:0000738!3.61e-13!140;CL:0002032!1.73e-11!165;CL:0000837!1.73e-11!165;CL:0000037!3.17e-11!172;CL:0000566!3.17e-11!172;CL:0000988!1.64e-09!182;CL:0002087!1.86e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-24;33!CL:0002057;1.30e-24;33!CL:0000473;5.01e-21;39!CL:0000234;5.01e-21;39!CL:0000576;6.13e-16;48!CL:0000766;3.63e-12;69!CL:0000197;9.27e-10;6!CL:0000098;9.27e-10;6!CL:0002167;9.27e-10;6!CL:0000453;3.59e-08;5 | |ontology_enrichment_celltype_v019=CL:0000860;1.30e-24;33!CL:0002057;1.30e-24;33!CL:0000473;5.01e-21;39!CL:0000234;5.01e-21;39!CL:0000576;6.13e-16;48!CL:0000766;3.63e-12;69!CL:0000197;9.27e-10;6!CL:0000098;9.27e-10;6!CL:0002167;9.27e-10;6!CL:0000453;3.59e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.47e-30,48;CL:0000234,6.47e-30,48;CL:0000860,1.28e-28,42;CL:0002057,1.28e-28,42;CL:0000557,9.39e-27,67;CL:0000839,4.75e-24,66;CL:0002009,5.20e-24,61;CL:0000766,1.64e-22,72;CL:0002194,7.08e-22,59;CL:0000576,7.08e-22,59;CL:0000040,7.08e-22,59;CL:0000559,7.08e-22,59;CL:0000763,1.57e-19,108;CL:0000049,1.57e-19,108;CL:0000738,3.29e-11,136;CL:0002031,3.19e-10,120;CL:0000197,8.95e-10,6;CL:0000098,8.95e-10,6;CL:0002167,8.95e-10,6;CL:0002032,3.77e-09,161;CL:0000837,3.77e-09,161;CL:0000037,7.50e-09,168;CL:0000453,3.87e-08,5;CL:0000988,7.59e-08,177;CL:0002087,5.28e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-19;42 | |ontology_enrichment_development_v019=CL:0002057;1.49e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.38e-23!80;UBERON:0001474!9.66e-21!86;UBERON:0004765!5.76e-17!101;UBERON:0001434!5.76e-17!101;UBERON:0002405!2.52e-14!115;UBERON:0002390!4.83e-14!102;UBERON:0003061!4.83e-14!102;UBERON:0002193!1.17e-12!112;UBERON:0001737!2.29e-10!9;UBERON:0002204!3.39e-10!167 | |ontology_enrichment_uberon=UBERON:0002371!7.38e-23!80;UBERON:0001474!9.66e-21!86;UBERON:0004765!5.76e-17!101;UBERON:0001434!5.76e-17!101;UBERON:0002405!2.52e-14!115;UBERON:0002390!4.83e-14!102;UBERON:0003061!4.83e-14!102;UBERON:0002193!1.17e-12!112;UBERON:0001737!2.29e-10!9;UBERON:0002204!3.39e-10!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.43e-16;9!UBERON:0001557;5.43e-16;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;5.43e-16;9!UBERON:0001557;5.43e-16;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.53e-24,76;UBERON:0001474,2.57e-21,82;UBERON:0004765,3.86e-21,90;UBERON:0002405,1.49e-18,93;UBERON:0001434,7.81e-18,100;UBERON:0002390,5.34e-16,98;UBERON:0003061,5.34e-16,98;UBERON:0001737,6.54e-16,9;UBERON:0002193,2.08e-14,108;UBERON:0002204,1.21e-12,167;UBERON:0003081,6.08e-08,203 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,4.70627602516243,4.21886169616784,8.03341099426111,7.80692478064811,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.54816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,1.30858414901608,4.53451132426571,2.18325655069035,0.697287110717054,0.822335776043652,2.47765096716083,1.1507695692886,0.768482119587302,2.60130452877444,1.03423704220986,5.16387746867061,2.70852973188684,2.25890807451126,3.82068610080984,2.9214052977861,1.83650335422542,2.88836124368484,1.91801137739712,0.989553900560148,0.997318288108159,2.13112375266347,1.16083695451434,2.26954089876456,4.35975574296902,0.75374599577023,4.17186334736161,4.12658804939722,0.605399502633369,3.31449872388808,3.16462387440884,1.69004229049553,2.55125159958052,2.51590374610051,1.23561494261145,2.10247649978109,2.4108838004562,0,1.39241674039363,1.0959849225878,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.84368859342554,0,0,0,2.34061093546949,0.32592226663359,0,3.89653456815823,3.56513462032555,0.294605907474837,3.1014745241707,2.16643091012012,1.0247305578054,1.1705341280389,0.657751618414705,0,1.73881851441031,0.889719378972363,1.33770414044857,1.04535523804977,2.15287751125376,0,0,2.27717722817553,0.318565414324097,0,0,0.602300476311091,0.255973222308837,0,0.473554504088034,0,0,0,0,0,0,5.62595272111533,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0.238490624305342,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,2.64818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,6.07594796068558,0,0,0,9.86040946594752,0,0,0,0,0,0,0,0,0.116193942869518,0,1.51392510525377,0.72995471815166,0,0,0,0,0,3.31259040111563,5.05754070234305,4.82022059766964,2.09558548191549,4.57546832594053,4.74541238222193,3.50561401216427,7.45641567476315,10.0034260806062,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,5.83330555014987,0.109750285408626,0,0,0,0,0,0,3.4779121492523,5.16598254637615,0,0.462985512576611,1.71228737011138,0,0,0,0,0,0,5.37542810236351,4.67857820899875,0,0,0,0,2.0251139823042,1.4512968087854,1.29707958075265,1.2624243342638,1.20645999155121,0,0,0,0,0.901029173531752,2.85826432630578,0,0,0,0,0,9.298330278116,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0,7.29742683847143,2.51128545716063,2.10833939483032,0,0,8.5582143024431,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,3.11956292296211,3.56857977594324,2.52323864054295,2.45996971484698,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06424511850606,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0.638063562472921,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,3.15504974848913,4.91245205065606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.766021480529467,0,3.89546328329467,0,0,0,0,2.03150133361924,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,3.78637949866376,0,0,0,0,0,0.111443384277478,0,1.67121139316383,5.64232893582013,0,2.98244294329889,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,2.55200927785536,4.1218917030838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,2.38568906942791,0,1.12527203925513,0.825236619583403,3.32352270423348,4.04953004792701,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0.886068179966986,0.366078794705889,0,1.14681839138014,0,0,0.276697269872462,0,0.151649117541648,0,0,0,0,0,0,0,0,0,9.7879234375619,0,0,0.15543720058278,0,0.159296767163702,12.5944871405809,0.155262956876259,2.90294345488599,0,10.4349012362347,0,7.9969094555447,0,0,0,10.6727764772054,4.37905477568478,0,12.7056410917633,6.06149079778654,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,3.3126252502696,1.0629187225069,2.78061170234935,0,0.245772908753719,0,0,0,0,0,0,3.63686720070556,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,4.85572483389305,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.078493092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| ||
|short_description=p@chr11:76917955..76917963,+ | |short_description=p@chr11:76917955..76917963,+ | ||
}} | }} |
Latest revision as of 02:42, 24 July 2015
Short description: | p@chr11:76917955..76917963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:76917955..76917963, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.47e-30 | 48 |
phagocyte | 6.47e-30 | 48 |
classical monocyte | 1.28e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-28 | 42 |
granulocyte monocyte progenitor cell | 9.39e-27 | 67 |
myeloid lineage restricted progenitor cell | 4.75e-24 | 66 |
macrophage dendritic cell progenitor | 5.20e-24 | 61 |
myeloid leukocyte | 1.64e-22 | 72 |
monopoietic cell | 7.08e-22 | 59 |
monocyte | 7.08e-22 | 59 |
monoblast | 7.08e-22 | 59 |
promonocyte | 7.08e-22 | 59 |
myeloid cell | 1.57e-19 | 108 |
common myeloid progenitor | 1.57e-19 | 108 |
leukocyte | 3.29e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 3.19e-10 | 120 |
receptor cell | 8.95e-10 | 6 |
sensory epithelial cell | 8.95e-10 | 6 |
olfactory epithelial cell | 8.95e-10 | 6 |
hematopoietic oligopotent progenitor cell | 3.77e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-09 | 161 |
hematopoietic stem cell | 7.50e-09 | 168 |
Langerhans cell | 3.87e-08 | 5 |
hematopoietic cell | 7.59e-08 | 177 |
nongranular leukocyte | 5.28e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.53e-24 | 76 |
bone element | 2.57e-21 | 82 |
skeletal element | 3.86e-21 | 90 |
immune system | 1.49e-18 | 93 |
skeletal system | 7.81e-18 | 100 |
hematopoietic system | 5.34e-16 | 98 |
blood island | 5.34e-16 | 98 |
larynx | 6.54e-16 | 9 |
hemolymphoid system | 2.08e-14 | 108 |
musculoskeletal system | 1.21e-12 | 167 |
lateral plate mesoderm | 6.08e-08 | 203 |