FFCP PHASE1:Hg19::chr14:29236460..29236467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2290 | |EntrezGene=2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |HGNC=3811 | ||
|TSSclassifier=strong | |||
|UniProt=P55316 | |UniProt=P55316 | ||
|association_with_transcript=173bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | |association_with_transcript=173bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | ||
|cluster_id=chr14:29236460..29236467,+ | |||
|coexpression_cluster_id=C361 | |coexpression_cluster_id=C361 | ||
|description=CAGE_peak_12_at_FOXG1_5end | |description=CAGE_peak_12_at_FOXG1_5end | ||
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|ontology_enrichment_celltype=CL:0002319!1.57e-19!25;CL:0000133!5.50e-15!59;CL:0000243!9.63e-13!15;CL:0000125!9.63e-13!15;CL:0000030!9.63e-13!15;CL:0000339!9.63e-13!15;CL:0000221!1.06e-11!71;CL:0000095!3.19e-11!17;CL:0000123!3.19e-11!17;CL:0000128!9.14e-11!7;CL:0000126!9.14e-11!7;CL:0000127!9.14e-11!7;CL:0002453!9.14e-11!7;CL:0000047!1.70e-10!8;CL:0002605!6.21e-10!3;CL:0000064!1.84e-09!3;CL:0005012!1.84e-09!3;CL:0000067!1.84e-09!3;CL:0002304!1.84e-09!3;CL:0000333!2.13e-07!41;CL:0000569!3.78e-07!4;CL:0000011!3.78e-07!4 | |ontology_enrichment_celltype=CL:0002319!1.57e-19!25;CL:0000133!5.50e-15!59;CL:0000243!9.63e-13!15;CL:0000125!9.63e-13!15;CL:0000030!9.63e-13!15;CL:0000339!9.63e-13!15;CL:0000221!1.06e-11!71;CL:0000095!3.19e-11!17;CL:0000123!3.19e-11!17;CL:0000128!9.14e-11!7;CL:0000126!9.14e-11!7;CL:0000127!9.14e-11!7;CL:0002453!9.14e-11!7;CL:0000047!1.70e-10!8;CL:0002605!6.21e-10!3;CL:0000064!1.84e-09!3;CL:0005012!1.84e-09!3;CL:0000067!1.84e-09!3;CL:0002304!1.84e-09!3;CL:0000333!2.13e-07!41;CL:0000569!3.78e-07!4;CL:0000011!3.78e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.96e-32;2!CL:0002319;2.23e-09;25 | |ontology_enrichment_celltype_v019=CL:0000047;4.96e-32;2!CL:0002319;2.23e-09;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.26e-18,8;CL:0002319,2.06e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.71e-09;2!UBERON:0009117;5.11e-07;10!UBERON:0005564;5.11e-07;10 | |ontology_enrichment_development_v019=UBERON:0010122;5.71e-09;2!UBERON:0009117;5.11e-07;10!UBERON:0005564;5.11e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002021;2.94e-13;5!UBERON:0001950;5.53e-12;20!UBERON:0002791;1.35e-11;32!UBERON:0001869;1.71e-11;32!UBERON:0002619;5.74e-11;22!UBERON:0000956;9.83e-10;25!UBERON:0000203;9.83e-10;25!UBERON:0001893;2.00e-09;34!UBERON:0001016;2.32e-09;83!UBERON:0003528;3.37e-09;34!UBERON:0002020;3.37e-09;34!UBERON:0001873;5.71e-09;2!UBERON:0001017;5.96e-09;75!UBERON:0002360;7.49e-09;2!UBERON:0000094;7.49e-09;2!UBERON:0010743;7.49e-09;2!UBERON:0000473;1.47e-08;8!UBERON:0002780;1.93e-08;41!UBERON:0001890;1.93e-08;41 | |ontology_enrichment_uberon_v019=UBERON:0002021;2.94e-13;5!UBERON:0001950;5.53e-12;20!UBERON:0002791;1.35e-11;32!UBERON:0001869;1.71e-11;32!UBERON:0002619;5.74e-11;22!UBERON:0000956;9.83e-10;25!UBERON:0000203;9.83e-10;25!UBERON:0001893;2.00e-09;34!UBERON:0001016;2.32e-09;83!UBERON:0003528;3.37e-09;34!UBERON:0002020;3.37e-09;34!UBERON:0001873;5.71e-09;2!UBERON:0001017;5.96e-09;75!UBERON:0002360;7.49e-09;2!UBERON:0000094;7.49e-09;2!UBERON:0010743;7.49e-09;2!UBERON:0000473;1.47e-08;8!UBERON:0002780;1.93e-08;41!UBERON:0001890;1.93e-08;41 | ||
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| ||
|short_description=p12@FOXG1 | |short_description=p12@FOXG1 | ||
}} | }} |
Latest revision as of 16:27, 19 September 2015
Short description: | p12@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FOXG1_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 173bp_to_ENST00000313071, NM_005249, uc001wqe.2_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.26e-18 | 8 |
neural cell | 2.06e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.77e-17 | 81 |
nervous system | 1.11e-15 | 89 |
occipital lobe | 3.03e-13 | 5 |
neocortex | 6.02e-12 | 20 |
regional part of telencephalon | 1.33e-11 | 32 |
cerebral hemisphere | 1.33e-11 | 32 |
brain grey matter | 6.12e-11 | 34 |
gray matter | 6.12e-11 | 34 |
telencephalon | 6.12e-11 | 34 |
regional part of cerebral cortex | 6.21e-11 | 22 |
cerebral cortex | 1.05e-09 | 25 |
pallium | 1.05e-09 | 25 |
regional part of forebrain | 4.08e-09 | 41 |
forebrain | 4.08e-09 | 41 |
anterior neural tube | 4.08e-09 | 41 |
future forebrain | 4.08e-09 | 41 |
caudate nucleus | 5.49e-09 | 2 |
future caudate nucleus | 5.49e-09 | 2 |
meninx | 7.49e-09 | 2 |
membrane organ | 7.49e-09 | 2 |
meningeal cluster | 7.49e-09 | 2 |
testis | 1.53e-08 | 8 |
ectoderm-derived structure | 7.89e-08 | 171 |
ectoderm | 7.89e-08 | 171 |
presumptive ectoderm | 7.89e-08 | 171 |
brain | 1.33e-07 | 68 |
future brain | 1.33e-07 | 68 |
organ system subdivision | 4.25e-07 | 223 |
regional part of nervous system | 4.43e-07 | 53 |
regional part of brain | 4.43e-07 | 53 |