FFCP PHASE1:Hg19::chr16:28912098..28912108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=487 | |EntrezGene=487 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=811 | |HGNC=811 | ||
|TSSclassifier=strong | |||
|UniProt=B3KS35 | |UniProt=B3KS35 | ||
|association_with_transcript=-48bp_to_AK092691_5end | |association_with_transcript=-48bp_to_AK092691_5end | ||
|cluster_id=chr16:28912098..28912108,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_8_at_ATP2A1_5end | |description=CAGE_peak_8_at_ATP2A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.48e-40;1!UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2 | |ontology_enrichment_development_v019=UBERON:0004874;1.48e-40;1!UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@ATP2A1 | |short_description=p8@ATP2A1 | ||
}} | }} |
Latest revision as of 01:32, 16 September 2015
Short description: | p8@ATP2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ATP2A1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -48bp_to_AK092691_5end |
EntrezGene: | ATP2A1 |
HGNC: | 811 |
UniProt: | B3KS35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.28e-53 | 3 |
gustatory system | 1.28e-53 | 3 |
future tongue | 1.28e-53 | 3 |
penis | 1.48e-40 | 1 |
intromittent organ | 1.48e-40 | 1 |
lateral plate mesenchyme | 1.48e-40 | 1 |
undifferentiated genital tubercle | 1.48e-40 | 1 |
somatopleure | 1.48e-40 | 1 |
chest muscle | 3.30e-40 | 1 |
respiratory system muscle | 3.30e-40 | 1 |
skeletal muscle of trunk | 3.30e-40 | 1 |
respiratory system skeletal muscle | 3.30e-40 | 1 |
thoracic segment muscle | 3.30e-40 | 1 |
chest organ | 3.30e-40 | 1 |
muscle of trunk | 3.30e-40 | 1 |
diaphragm | 3.30e-40 | 1 |
future diaphragm | 3.30e-40 | 1 |
throat | 5.70e-21 | 2 |
muscle structure | 6.96e-21 | 2 |
muscle organ | 6.96e-21 | 2 |
chordate pharynx | 5.90e-17 | 10 |
pharyngeal region of foregut | 5.90e-17 | 10 |
pharynx | 1.62e-15 | 11 |
pharyngeal arch system | 6.79e-10 | 18 |
upper respiratory tract | 1.99e-09 | 19 |
oral opening | 2.82e-08 | 22 |
sense organ | 1.15e-07 | 24 |
sensory system | 1.15e-07 | 24 |
entire sense organ system | 1.15e-07 | 24 |