FFCP PHASE1:Hg19::chrX:40944598..40944615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8239 | |EntrezGene=8239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12632 | |HGNC=12632 | ||
|TSSclassifier=strong | |||
|UniProt=Q93008,Q6P468,Q86X58 | |UniProt=Q93008,Q6P468,Q86X58 | ||
|association_with_transcript=-272bp_to_ENST00000324545,ENST00000378308,NM_001039590,NM_001039591,uc004dfb.2,uc004dfc.2_5end | |association_with_transcript=-272bp_to_ENST00000324545,ENST00000378308,NM_001039590,NM_001039591,uc004dfb.2,uc004dfc.2_5end | ||
|cluster_id=chrX:40944598..40944615,+ | |||
|description=CAGE_peak_3_at_USP9X_5end | |description=CAGE_peak_3_at_USP9X_5end | ||
|id=chrX:40944598..40944615,+ | |id=chrX:40944598..40944615,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.02e-14!140;CL:0002087!2.97e-13!119;CL:0002031!4.17e-13!124;CL:0002009!1.17e-11!65;CL:0000557!1.68e-11!71;CL:0002194!4.26e-11!63;CL:0000576!4.26e-11!63;CL:0000040!4.26e-11!63;CL:0000559!4.26e-11!63;CL:0000839!6.79e-11!70;CL:0000766!7.78e-11!76;CL:0000860!2.20e-10!45;CL:0002057!8.24e-10!42;CL:0000037!3.85e-09!172;CL:0000566!3.85e-09!172;CL:0002032!2.49e-08!165;CL:0000837!2.49e-08!165;CL:0000988!9.74e-07!182 | |ontology_enrichment_celltype=CL:0000738!5.02e-14!140;CL:0002087!2.97e-13!119;CL:0002031!4.17e-13!124;CL:0002009!1.17e-11!65;CL:0000557!1.68e-11!71;CL:0002194!4.26e-11!63;CL:0000576!4.26e-11!63;CL:0000040!4.26e-11!63;CL:0000559!4.26e-11!63;CL:0000839!6.79e-11!70;CL:0000766!7.78e-11!76;CL:0000860!2.20e-10!45;CL:0002057!8.24e-10!42;CL:0000037!3.85e-09!172;CL:0000566!3.85e-09!172;CL:0002032!2.49e-08!165;CL:0000837!2.49e-08!165;CL:0000988!9.74e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-08;33!CL:0002057;1.80e-08;33!CL:0000473;4.65e-07;39!CL:0000234;4.65e-07;39!CL:0000576;5.13e-07;48 | |ontology_enrichment_celltype_v019=CL:0000860;1.80e-08;33!CL:0002057;1.80e-08;33!CL:0000473;4.65e-07;39!CL:0000234;4.65e-07;39!CL:0000576;5.13e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.79e-13,136;CL:0002087,3.08e-12,115;CL:0002031,4.23e-12,120;CL:0002009,1.20e-10,61;CL:0000557,1.67e-10,67;CL:0002194,4.30e-10,59;CL:0000576,4.30e-10,59;CL:0000040,4.30e-10,59;CL:0000559,4.30e-10,59;CL:0000766,5.20e-10,72;CL:0000839,6.58e-10,66;CL:0000860,7.42e-10,42;CL:0002057,7.42e-10,42;CL:0000473,1.65e-09,48;CL:0000234,1.65e-09,48;CL:0000037,1.74e-08,168;CL:0002032,1.07e-07,161;CL:0000837,1.07e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.26e-07;42 | |ontology_enrichment_development_v019=CL:0002057;5.26e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.45e-08!86;UBERON:0002371!8.50e-08!80;UBERON:0004765!1.19e-07!101;UBERON:0001434!1.19e-07!101;UBERON:0002390!1.53e-07!102;UBERON:0003061!1.53e-07!102 | |ontology_enrichment_uberon=UBERON:0001474!1.45e-08!86;UBERON:0002371!8.50e-08!80;UBERON:0004765!1.19e-07!101;UBERON:0001434!1.19e-07!101;UBERON:0002390!1.53e-07!102;UBERON:0003061!1.53e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.00e-08,82;UBERON:0002371,4.83e-07,76;UBERON:0002390,7.47e-07,98;UBERON:0003061,7.47e-07,98 | |||
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| ||
|short_description=p3@USP9X | |short_description=p3@USP9X | ||
}} | }} |
Latest revision as of 01:48, 25 September 2015
Short description: | p3@USP9X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_USP9X_5end |
Coexpression cluster: | NA |
Association with transcript: | -272bp_to_ENST00000324545, ENST00000378308, NM_001039590, NM_001039591, uc004dfb.2, uc004dfc.2_5end |
EntrezGene: | USP9X |
HGNC: | 12632 |
UniProt: | Q93008Q6P468Q86X58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.79e-13 | 136 |
nongranular leukocyte | 3.08e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.23e-12 | 120 |
macrophage dendritic cell progenitor | 1.20e-10 | 61 |
granulocyte monocyte progenitor cell | 1.67e-10 | 67 |
monopoietic cell | 4.30e-10 | 59 |
monocyte | 4.30e-10 | 59 |
monoblast | 4.30e-10 | 59 |
promonocyte | 4.30e-10 | 59 |
myeloid leukocyte | 5.20e-10 | 72 |
myeloid lineage restricted progenitor cell | 6.58e-10 | 66 |
classical monocyte | 7.42e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.42e-10 | 42 |
defensive cell | 1.65e-09 | 48 |
phagocyte | 1.65e-09 | 48 |
hematopoietic stem cell | 1.74e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.07e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.00e-08 | 82 |
bone marrow | 4.83e-07 | 76 |
hematopoietic system | 7.47e-07 | 98 |
blood island | 7.47e-07 | 98 |