FFCP PHASE1:Hg19::chr1:89735223..89735236,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:89735223..89735236,-
|short_description=p8@GBP5
|description=CAGE_peak_8_at_GBP5_5end
|association_with_transcript=1bp_to_AF288815_5end
|EntrezGene=115362...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115362 | |EntrezGene=115362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19895 | |HGNC=19895 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PP8 | |UniProt=Q96PP8 | ||
|association_with_transcript=1bp_to_AF288815_5end | |||
|cluster_id=chr1:89735223..89735236,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_8_at_GBP5_5end | |||
|id=chr1:89735223..89735236,- | |||
|ontology_enrichment_celltype=CL:0002057!3.94e-32!42;CL:0000860!9.98e-30!45;CL:0002087!3.96e-21!119;CL:0000738!1.33e-20!140;CL:0000766!4.05e-20!76;CL:0002194!9.58e-20!63;CL:0000576!9.58e-20!63;CL:0000040!9.58e-20!63;CL:0000559!9.58e-20!63;CL:0002009!4.98e-19!65;CL:0002031!2.84e-18!124;CL:0000839!2.04e-17!70;CL:0000557!4.03e-17!71;CL:0000037!1.09e-15!172;CL:0000566!1.09e-15!172;CL:0002032!3.66e-15!165;CL:0000837!3.66e-15!165;CL:0000988!1.66e-14!182;CL:0000763!2.46e-12!112;CL:0000049!2.46e-12!112;CL:0000775!7.53e-08!3;CL:0000625!2.16e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-53;33!CL:0002057;2.52e-53;33!CL:0000473;7.06e-40;39!CL:0000234;7.06e-40;39!CL:0000576;3.19e-30;48!CL:0000766;1.13e-11;69!CL:0000763;2.01e-09;100!CL:0002087;3.80e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-46,42;CL:0002057,1.32e-46,42;CL:0000473,1.04e-40,48;CL:0000234,1.04e-40,48;CL:0002194,1.92e-32,59;CL:0000576,1.92e-32,59;CL:0000040,1.92e-32,59;CL:0000559,1.92e-32,59;CL:0002009,2.25e-31,61;CL:0000839,5.53e-29,66;CL:0000557,1.51e-28,67;CL:0000766,1.52e-26,72;CL:0002087,1.16e-19,115;CL:0002031,8.13e-19,120;CL:0000763,1.58e-17,108;CL:0000049,1.58e-17,108;CL:0000738,1.60e-16,136;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.69e-38;42!CL:0000049;1.23e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.59e-15!80;UBERON:0002390!6.65e-14!102;UBERON:0003061!6.65e-14!102;UBERON:0001474!1.65e-13!86;UBERON:0002193!2.69e-12!112;UBERON:0004765!5.72e-11!101;UBERON:0001434!5.72e-11!101;UBERON:0002405!3.37e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-25,76;UBERON:0001474,2.92e-23,82;UBERON:0004765,3.77e-21,90;UBERON:0002405,1.89e-20,93;UBERON:0002390,2.23e-19,98;UBERON:0003061,2.23e-19,98;UBERON:0001434,5.58e-19,100;UBERON:0002193,1.58e-17,108;UBERON:0002204,4.56e-11,167;UBERON:0003081,6.06e-09,203 | |||
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|short_description=p8@GBP5 | |||
}} | }} |
Latest revision as of 16:58, 19 September 2015
Short description: | p8@GBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GBP5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 1bp_to_AF288815_5end |
EntrezGene: | GBP5 |
HGNC: | 19895 |
UniProt: | Q96PP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.32e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-46 | 42 |
defensive cell | 1.04e-40 | 48 |
phagocyte | 1.04e-40 | 48 |
monopoietic cell | 1.92e-32 | 59 |
monocyte | 1.92e-32 | 59 |
monoblast | 1.92e-32 | 59 |
promonocyte | 1.92e-32 | 59 |
macrophage dendritic cell progenitor | 2.25e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.53e-29 | 66 |
granulocyte monocyte progenitor cell | 1.51e-28 | 67 |
myeloid leukocyte | 1.52e-26 | 72 |
nongranular leukocyte | 1.16e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 8.13e-19 | 120 |
myeloid cell | 1.58e-17 | 108 |
common myeloid progenitor | 1.58e-17 | 108 |
leukocyte | 1.60e-16 | 136 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-25 | 76 |
bone element | 2.92e-23 | 82 |
skeletal element | 3.77e-21 | 90 |
immune system | 1.89e-20 | 93 |
hematopoietic system | 2.23e-19 | 98 |
blood island | 2.23e-19 | 98 |
skeletal system | 5.58e-19 | 100 |
hemolymphoid system | 1.58e-17 | 108 |
musculoskeletal system | 4.56e-11 | 167 |
lateral plate mesoderm | 6.06e-09 | 203 |