FFCP PHASE1:Hg19::chr14:70237255..70237260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6430 | |EntrezGene=6430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |HGNC=10787 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=90bp_to_ENST00000556647_5end | |association_with_transcript=90bp_to_ENST00000556647_5end | ||
|cluster_id=chr14:70237255..70237260,+ | |||
|description=CAGE_peak_40_at_SRSF5_5end | |description=CAGE_peak_40_at_SRSF5_5end | ||
|id=chr14:70237255..70237260,+ | |id=chr14:70237255..70237260,+ | ||
|ontology_enrichment_celltype=CL:0000080!8.30e-07!6 | |ontology_enrichment_celltype=CL:0000080!8.30e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.31e-14;3!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |ontology_enrichment_celltype_v019=CL:0000775;1.31e-14;3!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.22e-14,3;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.21e-17;10!UBERON:0005564;7.21e-17;10!CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |ontology_enrichment_development_v019=UBERON:0009117;7.21e-17;10!UBERON:0005564;7.21e-17;10!CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.54e-21;8!UBERON:0003135;1.95e-15;11!UBERON:0000991;1.39e-08;21!UBERON:0003101;3.09e-08;22!UBERON:0000079;3.09e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.54e-21;8!UBERON:0003135;1.95e-15;11!UBERON:0000991;1.39e-08;21!UBERON:0003101;3.09e-08;22!UBERON:0000079;3.09e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.12e-21,8;UBERON:0003135,1.88e-15,11;UBERON:0000991,1.37e-08,21;UBERON:0009196,1.37e-08,21;UBERON:0009117,1.37e-08,21;UBERON:0005564,1.37e-08,21;UBERON:0004176,3.04e-08,22;UBERON:0003101,3.04e-08,22;UBERON:0000079,3.04e-08,22 | |||
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| ||
|short_description=p40@SRSF5 | |short_description=p40@SRSF5 | ||
}} | }} |
Latest revision as of 19:47, 15 September 2015
Short description: | p40@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_SRSF5_5end |
Coexpression cluster: | NA |
Association with transcript: | 90bp_to_ENST00000556647_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.22e-14 | 3 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 8.12e-21 | 8 |
male reproductive organ | 1.88e-15 | 11 |
gonad | 1.37e-08 | 21 |
indifferent external genitalia | 1.37e-08 | 21 |
indifferent gonad | 1.37e-08 | 21 |
gonad primordium | 1.37e-08 | 21 |
external genitalia | 3.04e-08 | 22 |
male organism | 3.04e-08 | 22 |
male reproductive system | 3.04e-08 | 22 |