FFCP PHASE1:Hg19::chr9:74838100..74838111,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:74838100..74838111,+ | |||
|coexpression_cluster_id=C4828 | |coexpression_cluster_id=C4828 | ||
|description=CAGE_peak_at_chr9:74838100..74838111,+ | |description=CAGE_peak_at_chr9:74838100..74838111,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!5.11e-11!3;CL:0000861!5.11e-11!3 | |ontology_enrichment_celltype=CL:0002150!5.11e-11!3;CL:0000861!5.11e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6 | |ontology_enrichment_celltype_v019=CL:0002149;1.50e-09;6!CL:0002255;1.50e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.57e-09,6;CL:0002255,1.57e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.94e-11;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.94e-11;5 | ||
|ontology_enrichment_disease=DOID:305!9.57e-19!106;DOID:0050687!2.22e-13!143;DOID:299!1.32e-08!25;DOID:162!7.60e-07!235 | |ontology_enrichment_disease=DOID:305!9.57e-19!106;DOID:0050687!2.22e-13!143;DOID:299!1.32e-08!25;DOID:162!7.60e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3112;2.42e-50;1!DOID:4556;1.03e-17;3!DOID:3908;3.42e-11;5!DOID:3001;1.50e-09;6!DOID:299;5.60e-09;25!DOID:3905;8.61e-07;9 | |ontology_enrichment_disease_v019=DOID:3112;2.42e-50;1!DOID:4556;1.03e-17;3!DOID:3908;3.42e-11;5!DOID:3001;1.50e-09;6!DOID:299;5.60e-09;25!DOID:3905;8.61e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,2.42e-50,1;DOID:4556,9.46e-18,3;DOID:3908,3.26e-11,5;DOID:3001,1.57e-09,6;DOID:299,5.71e-09,25;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.09e-32!9;UBERON:0001557!1.96e-14!19;UBERON:0001869!4.58e-13!32;UBERON:0001893!3.58e-12!34;UBERON:0002791!1.50e-10!33;UBERON:0002020!3.48e-10!34;UBERON:0003528!3.48e-10!34;UBERON:0001950!5.89e-10!20;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0008947!1.30e-09!38;UBERON:0003258!1.30e-09!38;UBERON:0003080!1.94e-09!42;UBERON:0002619!5.64e-09!22;UBERON:0001007!1.14e-08!155;UBERON:0001555!1.14e-08!155;UBERON:0007026!1.14e-08!155;UBERON:0004119!2.79e-08!169;UBERON:0000925!2.79e-08!169;UBERON:0006595!2.79e-08!169;UBERON:0000369!3.14e-08!4;UBERON:0002435!3.14e-08!4;UBERON:0000204!3.14e-08!4;UBERON:0010082!3.14e-08!4;UBERON:0000956!8.69e-08!25;UBERON:0000203!8.69e-08!25;UBERON:0000072!1.49e-07!46;UBERON:0004921!1.97e-07!129;UBERON:0004185!1.97e-07!129 | |ontology_enrichment_uberon=UBERON:0001737!2.09e-32!9;UBERON:0001557!1.96e-14!19;UBERON:0001869!4.58e-13!32;UBERON:0001893!3.58e-12!34;UBERON:0002791!1.50e-10!33;UBERON:0002020!3.48e-10!34;UBERON:0003528!3.48e-10!34;UBERON:0001950!5.89e-10!20;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0008947!1.30e-09!38;UBERON:0003258!1.30e-09!38;UBERON:0003080!1.94e-09!42;UBERON:0002619!5.64e-09!22;UBERON:0001007!1.14e-08!155;UBERON:0001555!1.14e-08!155;UBERON:0007026!1.14e-08!155;UBERON:0004119!2.79e-08!169;UBERON:0000925!2.79e-08!169;UBERON:0006595!2.79e-08!169;UBERON:0000369!3.14e-08!4;UBERON:0002435!3.14e-08!4;UBERON:0000204!3.14e-08!4;UBERON:0010082!3.14e-08!4;UBERON:0000956!8.69e-08!25;UBERON:0000203!8.69e-08!25;UBERON:0000072!1.49e-07!46;UBERON:0004921!1.97e-07!129;UBERON:0004185!1.97e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;4.32e-26;2!UBERON:0002046;2.94e-11;5!UBERON:0000200;1.22e-09;6!UBERON:0001871;1.89e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0002771;4.32e-26;2!UBERON:0002046;2.94e-11;5!UBERON:0000200;1.22e-09;6!UBERON:0001871;1.89e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,4.32e-26,2;UBERON:0002046,2.94e-11,5;UBERON:0004117,2.94e-11,5;UBERON:0007689,2.94e-11,5;UBERON:0007123,2.94e-11,5;UBERON:0003091,2.94e-11,5;UBERON:0000200,1.22e-09,6;UBERON:0001871,1.89e-08,6 | |||
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| ||
|short_description=p@chr9:74838100..74838111,+ | |short_description=p@chr9:74838100..74838111,+ | ||
}} | }} |
Latest revision as of 02:37, 1 August 2015
Short description: | p@chr9:74838100..74838111, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:74838100..74838111, + |
Coexpression cluster: | C4828_large_medial_gastric_papillary_embryonic_hippocampus_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.57e-09 | 6 |
stromal cell of endometrium | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 4.32e-26 | 2 |
thyroid gland | 2.94e-11 | 5 |
pharyngeal pouch | 2.94e-11 | 5 |
thyroid diverticulum | 2.94e-11 | 5 |
pharyngeal pouch 2 | 2.94e-11 | 5 |
thyroid primordium | 2.94e-11 | 5 |
gyrus | 1.22e-09 | 6 |
temporal lobe | 1.89e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.42e-50 | 1 |
lung large cell carcinoma | 9.46e-18 | 3 |
non-small cell lung carcinoma | 3.26e-11 | 5 |
female reproductive endometrioid cancer | 1.57e-09 | 6 |
adenocarcinoma | 5.71e-09 | 25 |
lung carcinoma | 8.37e-07 | 9 |