FFCP PHASE1:Hg19::chr20:21538200..21538210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:21538200..21538210,+ | |||
|coexpression_cluster_id=C1865 | |coexpression_cluster_id=C1865 | ||
|description=CAGE_peak_at_chr20:21538200..21538210,+ | |description=CAGE_peak_at_chr20:21538200..21538210,+ | ||
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|ontology_enrichment_celltype=CL:0000791!2.41e-19!18;CL:0000789!2.41e-19!18;CL:0002420!2.41e-19!18;CL:0002419!2.41e-19!18;CL:0000790!2.41e-19!18;CL:0000084!2.40e-17!25;CL:0000827!2.40e-17!25;CL:0000080!3.37e-16!6;CL:0000838!6.73e-16!52;CL:0000624!8.49e-16!6;CL:0000542!1.50e-15!53;CL:0000051!1.50e-15!53;CL:0000815!9.00e-13!2;CL:0000792!9.00e-13!2;CL:0002677!9.00e-13!2;CL:0000898!8.41e-09!3;CL:0000946!7.29e-07!1;CL:0000786!7.29e-07!1;CL:0000980!7.29e-07!1;CL:0002127!7.73e-07!1;CL:0000914!7.73e-07!1;CL:0000911!7.73e-07!1;CL:0000814!7.73e-07!1;CL:0002042!7.73e-07!1;CL:0002039!7.73e-07!1;CL:0002040!7.73e-07!1;CL:0002041!7.73e-07!1 | |ontology_enrichment_celltype=CL:0000791!2.41e-19!18;CL:0000789!2.41e-19!18;CL:0002420!2.41e-19!18;CL:0002419!2.41e-19!18;CL:0000790!2.41e-19!18;CL:0000084!2.40e-17!25;CL:0000827!2.40e-17!25;CL:0000080!3.37e-16!6;CL:0000838!6.73e-16!52;CL:0000624!8.49e-16!6;CL:0000542!1.50e-15!53;CL:0000051!1.50e-15!53;CL:0000815!9.00e-13!2;CL:0000792!9.00e-13!2;CL:0002677!9.00e-13!2;CL:0000898!8.41e-09!3;CL:0000946!7.29e-07!1;CL:0000786!7.29e-07!1;CL:0000980!7.29e-07!1;CL:0002127!7.73e-07!1;CL:0000914!7.73e-07!1;CL:0000911!7.73e-07!1;CL:0000814!7.73e-07!1;CL:0002042!7.73e-07!1;CL:0002039!7.73e-07!1;CL:0002040!7.73e-07!1;CL:0002041!7.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.14e-13;2!CL:0000792;1.14e-13;2!CL:0002677;1.14e-13;2!CL:0000084;1.24e-09;25!CL:0000898;1.47e-09;3 | |ontology_enrichment_celltype_v019=CL:0000815;1.14e-13;2!CL:0000792;1.14e-13;2!CL:0002677;1.14e-13;2!CL:0000084;1.24e-09;25!CL:0000898;1.47e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.55e-13,2;CL:0000792,1.55e-13,2;CL:0002677,1.55e-13,2;CL:0000084,1.39e-09,25;CL:0000827,1.39e-09,25;CL:0000898,1.81e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.65e-10!15;UBERON:0000179!8.65e-10!15;UBERON:0000463!8.65e-10!15 | |ontology_enrichment_uberon=UBERON:0000178!8.65e-10!15;UBERON:0000179!8.65e-10!15;UBERON:0000463!8.65e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.29e-11;10!UBERON:0000178;1.49e-07;15!UBERON:0000179;1.49e-07;15!UBERON:0000463;1.49e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0002331;7.29e-11;10!UBERON:0000178;1.49e-07;15!UBERON:0000179;1.49e-07;15!UBERON:0000463;1.49e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.98e-11,10;UBERON:0000358,5.98e-11,10;UBERON:0000307,5.98e-11,10;UBERON:0000091,5.98e-11,10;UBERON:0000087,5.98e-11,10;UBERON:0007010,5.98e-11,10;UBERON:0007806,5.98e-11,10;UBERON:0008780,5.98e-11,10;UBERON:0005728,5.98e-11,10;UBERON:0000178,1.31e-07,15;UBERON:0000179,1.31e-07,15;UBERON:0000463,1.31e-07,15 | |||
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|short_description=p@chr20:21538200..21538210,+ | |short_description=p@chr20:21538200..21538210,+ | ||
}} | }} |
Latest revision as of 12:24, 28 July 2015
Short description: | p@chr20:21538200..21538210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:21538200..21538210, + |
Coexpression cluster: | C1865_adult_CD4_CD8_cord_lymphangiectasia_B_xeroderma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.55e-13 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.55e-13 | 2 |
naive regulatory T cell | 1.55e-13 | 2 |
T cell | 1.39e-09 | 25 |
pro-T cell | 1.39e-09 | 25 |
naive T cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.98e-11 | 10 |
blastocyst | 5.98e-11 | 10 |
blastula | 5.98e-11 | 10 |
bilaminar disc | 5.98e-11 | 10 |
inner cell mass | 5.98e-11 | 10 |
cleaving embryo | 5.98e-11 | 10 |
connecting stalk | 5.98e-11 | 10 |
inner cell mass derived epiblast | 5.98e-11 | 10 |
extraembryonic mesoderm | 5.98e-11 | 10 |
blood | 1.31e-07 | 15 |
haemolymphatic fluid | 1.31e-07 | 15 |
organism substance | 1.31e-07 | 15 |