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FFCP PHASE1:Hg19::chr11:36119821..36119838,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=143458
|EntrezGene=143458
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=27046
|HGNC=27046
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-38bp_to_uc010rfa.1_5end
|association_with_transcript=-38bp_to_uc010rfa.1_5end
|cluster_id=chr11:36119821..36119838,+
|coexpression_cluster_id=C212
|coexpression_cluster_id=C212
|description=CAGE_peak_3_at_LDLRAD3_5end
|description=CAGE_peak_3_at_LDLRAD3_5end
Line 9: Line 14:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000763;5.18e-08;100
|ontology_enrichment_celltype_v019=CL:0000763;5.18e-08;100
|ontology_enrichment_celltype_v019_2=CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:8692!2.04e-13!31;DOID:1036!1.33e-10!8;DOID:1240!1.65e-10!39;DOID:8552!1.80e-10!1;DOID:9119!2.16e-10!1;DOID:2531!7.51e-08!51;DOID:0060083!7.51e-08!51
|ontology_enrichment_disease=DOID:8692!2.04e-13!31;DOID:1036!1.33e-10!8;DOID:1240!1.65e-10!39;DOID:8552!1.80e-10!1;DOID:9119!2.16e-10!1;DOID:2531!7.51e-08!51;DOID:0060083!7.51e-08!51
|ontology_enrichment_disease_v019=DOID:8692;6.37e-29;31!DOID:8552;2.78e-26;1!DOID:9119;4.61e-26;1!DOID:1240;1.73e-15;39!DOID:1036;1.83e-13;8!DOID:2531;1.58e-12;51!DOID:0060083;1.58e-12;51
|ontology_enrichment_disease_v019=DOID:8692;6.37e-29;31!DOID:8552;2.78e-26;1!DOID:9119;4.61e-26;1!DOID:1240;1.73e-15;39!DOID:1036;1.83e-13;8!DOID:2531;1.58e-12;51!DOID:0060083;1.58e-12;51
|ontology_enrichment_disease_v019_2=DOID:8692,7.10e-29,31;DOID:8552,2.78e-26,1;DOID:9119,4.61e-26,1;DOID:1240,5.20e-23,39;DOID:2531,1.19e-17,51;DOID:0060083,1.19e-17,51;DOID:1036,1.83e-13,8
|ontology_enrichment_uberon=UBERON:0002372!9.82e-10!1;UBERON:0001961!9.82e-10!1;UBERON:0001744!9.82e-10!1;UBERON:0001735!9.82e-10!1;UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1
|ontology_enrichment_uberon=UBERON:0002372!9.82e-10!1;UBERON:0001961!9.82e-10!1;UBERON:0001744!9.82e-10!1;UBERON:0001735!9.82e-10!1;UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,10.9913749439281,11.278960407028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4658761425117,0,0,0.167821586975843,0,31.3105060591346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4329961204643,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p3@LDLRAD3
|short_description=p3@LDLRAD3
}}
}}

Latest revision as of 21:13, 17 September 2015

Short description:p3@LDLRAD3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_LDLRAD3_5end
Coexpression cluster:C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34
Association with transcript: -38bp_to_uc010rfa.1_5end
EntrezGene:LDLRAD3
HGNC: 27046
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data