FFCP PHASE1:Hg19::chr15:50411469..50411470,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79895 | |EntrezGene=79895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13536 | |HGNC=13536 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000558906_5end | |association_with_transcript=-46bp_to_ENST00000558906_5end | ||
|cluster_id=chr15:50411469..50411470,- | |||
|coexpression_cluster_id=C3495 | |coexpression_cluster_id=C3495 | ||
|description=CAGE_peak_16_at_ATP8B4_5end | |description=CAGE_peak_16_at_ATP8B4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000988!3.71e-15!182;CL:0002274!1.74e-14!5;CL:0000457!1.74e-14!5;CL:0002191!1.74e-14!5;CL:0000097!1.74e-14!5;CL:0000831!1.74e-14!5;CL:0002028!1.74e-14!5;CL:0000763!4.40e-13!112;CL:0000049!4.40e-13!112;CL:0000037!1.22e-12!172;CL:0000566!1.22e-12!172;CL:0000080!1.60e-11!6;CL:0002032!3.90e-11!165;CL:0000837!3.90e-11!165;CL:0000163!4.60e-08!9 | |ontology_enrichment_celltype=CL:0000988!3.71e-15!182;CL:0002274!1.74e-14!5;CL:0000457!1.74e-14!5;CL:0002191!1.74e-14!5;CL:0000097!1.74e-14!5;CL:0000831!1.74e-14!5;CL:0002028!1.74e-14!5;CL:0000763!4.40e-13!112;CL:0000049!4.40e-13!112;CL:0000037!1.22e-12!172;CL:0000566!1.22e-12!172;CL:0000080!1.60e-11!6;CL:0002032!3.90e-11!165;CL:0000837!3.90e-11!165;CL:0000163!4.60e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.16e-26;1!CL:0000557;2.16e-26;1!CL:0000037;7.62e-26;1!CL:0001024;7.62e-26;1!CL:0000097;8.98e-21;5!CL:0001014;1.21e-13;2!CL:0001016;1.21e-13;2!CL:0000163;5.22e-12;9 | |ontology_enrichment_celltype_v019=CL:0002032;2.16e-26;1!CL:0000557;2.16e-26;1!CL:0000037;7.62e-26;1!CL:0001024;7.62e-26;1!CL:0000097;8.98e-21;5!CL:0001014;1.21e-13;2!CL:0001016;1.21e-13;2!CL:0000163;5.22e-12;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0001024,9.79e-26,1;CL:0000097,8.98e-21,5;CL:0002028,8.98e-21,5;CL:0001014,1.07e-13,2;CL:0001016,1.07e-13,2;CL:0000163,5.22e-12,9;CL:0000763,2.59e-08,108;CL:0000049,2.59e-08,108;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1240!5.68e-11!39;DOID:8692!1.13e-09!31;DOID:2531!6.99e-08!51;DOID:0060083!6.99e-08!51 | |ontology_enrichment_disease=DOID:1240!5.68e-11!39;DOID:8692!1.13e-09!31;DOID:2531!6.99e-08!51;DOID:0060083!6.99e-08!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-09!102;UBERON:0003061!2.78e-09!102;UBERON:0002193!4.14e-08!112;UBERON:0000178!6.22e-07!15;UBERON:0000179!6.22e-07!15;UBERON:0000463!6.22e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.78e-09!102;UBERON:0003061!2.78e-09!102;UBERON:0002193!4.14e-08!112;UBERON:0000178!6.22e-07!15;UBERON:0000179!6.22e-07!15;UBERON:0000463!6.22e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002371;2.77e-09;12 | |ontology_enrichment_uberon_v019=UBERON:0002371;2.77e-09;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.73e-08,76;UBERON:0001474,1.06e-07,82;UBERON:0004765,4.89e-07,90;UBERON:0002405,8.13e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.520237390239513,0.493313713811028,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,2.46535615237033,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0.399158742865633,4.5961288831768,0.423347165447766,0,1.96558024679421,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.617819694732514,0.417687798021821,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94226116468806,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.520237390239513,0.493313713811028,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,2.46535615237033,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0.399158742865633,4.5961288831768,0.423347165447766,0,1.96558024679421,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.617819694732514,0.417687798021821,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94226116468806,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p16@ATP8B4 | |short_description=p16@ATP8B4 | ||
}} | }} |
Latest revision as of 23:10, 17 September 2015
Short description: | p16@ATP8B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ATP8B4_5end |
Coexpression cluster: | C3495_Mast_granulocyte_acute_CD34_immature_CD133_cord |
Association with transcript: | -46bp_to_ENST00000558906_5end |
EntrezGene: | ATP8B4 |
HGNC: | 13536 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 9.79e-26 | 1 |
mast cell | 8.98e-21 | 5 |
basophil mast progenitor cell | 8.98e-21 | 5 |
CD1a-positive Langerhans cell | 1.07e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-13 | 2 |
endocrine cell | 5.22e-12 | 9 |
myeloid cell | 2.59e-08 | 108 |
common myeloid progenitor | 2.59e-08 | 108 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.73e-08 | 76 |
bone element | 1.06e-07 | 82 |
skeletal element | 4.89e-07 | 90 |
immune system | 8.13e-07 | 93 |