FFCP PHASE1:Hg19::chr1:87012753..87012767,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:87012753..87012767,+
|short_description=p1@CLCA4
|description=CAGE_peak_1_at_CLCA4_5end
|association_with_transcript=0bp_to_ENST00000370563,NM_012128,NR_02...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22802 | |EntrezGene=22802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2018 | |HGNC=2018 | ||
|TSSclassifier=strong | |||
|UniProt=Q14CN2 | |UniProt=Q14CN2 | ||
|association_with_transcript=0bp_to_ENST00000370563,NM_012128,NR_024602,uc009wcs.2,uc009wct.2,uc009wcu.2_5end | |||
|cluster_id=chr1:87012753..87012767,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_CLCA4_5end | |||
|id=chr1:87012753..87012767,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.18e-10!43;CL:0002623!5.51e-08!3;CL:0002368!5.76e-08!13;CL:0000223!2.53e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.39e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.09e-07;1!UBERON:0001045;5.43e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-15!115;UBERON:0004119!4.50e-12!169;UBERON:0000925!4.50e-12!169;UBERON:0006595!4.50e-12!169;UBERON:0000161!8.86e-11!35;UBERON:0004921!7.90e-10!129;UBERON:0004185!7.90e-10!129;UBERON:0001007!6.69e-09!155;UBERON:0001555!6.69e-09!155;UBERON:0007026!6.69e-09!155;UBERON:0001004!3.36e-08!72;UBERON:0003408!8.03e-08!10;UBERON:0006562!1.81e-07!11;UBERON:0001044!9.07e-07!6;UBERON:0003293!9.07e-07!6;UBERON:0003294!9.07e-07!6;UBERON:0010047!9.07e-07!6;UBERON:0000167!9.07e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.74e-12;33!UBERON:0003127;2.55e-12;2!UBERON:0006562;1.03e-11;2!UBERON:0001723;2.52e-08;3!UBERON:0001033;2.52e-08;3!UBERON:0001044;3.53e-08;6!UBERON:0003293;3.53e-08;6!UBERON:0003294;3.53e-08;6!UBERON:0010047;3.53e-08;6!UBERON:0003408;3.53e-08;6!UBERON:0000167;3.53e-08;6!UBERON:0003126;1.57e-07;7!UBERON:0001005;1.57e-07;7!UBERON:0002372;4.85e-07;1!UBERON:0001961;4.85e-07;1!UBERON:0001744;4.85e-07;1!UBERON:0001042;4.85e-07;1!UBERON:0001735;4.85e-07;1!UBERON:0001154;5.43e-07;1!UBERON:0001153;5.43e-07;1!UBERON:0009854;5.43e-07;1!UBERON:0000996;7.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.30e-13,118;UBERON:0000161,4.79e-13,36;UBERON:0003127,2.55e-12,2;UBERON:0004119,2.82e-11,160;UBERON:0000925,2.82e-11,160;UBERON:0006595,2.82e-11,160;UBERON:0001007,2.72e-10,145;UBERON:0001555,2.72e-10,145;UBERON:0007026,2.72e-10,145;UBERON:0007023,8.36e-09,114;UBERON:0001723,2.57e-08,3;UBERON:0001033,2.57e-08,3;UBERON:0010056,2.57e-08,3;UBERON:0000166,3.88e-08,22;UBERON:0001044,4.06e-08,6;UBERON:0003293,4.06e-08,6;UBERON:0003294,4.06e-08,6;UBERON:0010047,4.06e-08,6;UBERON:0000167,4.06e-08,6;UBERON:0006562,4.27e-08,11;UBERON:0003126,1.66e-07,7;UBERON:0001005,1.66e-07,7;UBERON:0002372,4.85e-07,1;UBERON:0001961,4.85e-07,1;UBERON:0001744,4.85e-07,1;UBERON:0001735,4.85e-07,1;UBERON:0001046,5.05e-07,19;UBERON:0001154,5.43e-07,1;UBERON:0001153,5.43e-07,1;UBERON:0001045,5.43e-07,1;UBERON:0000996,7.60e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,4.14364450211533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,4.33883222481586,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0.188287601553558,0,3.36942951335251,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,38.9560320898918,0,0,0,0,0,0,0,20.7151151837561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0,0,0,0,3.20674611840788,50.9410711295137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8436437255907,0.796118080530053,5.49927130440263,0,0,0,0.202203398942031,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95984794828755,0,0,0,0,0,0,715.584963651558,0,2.93774963014692,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,21.6664547276226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0,0,0,0,0,4.46838880439127,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,3.96968942711435,0,1.91643641459393,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,7.69232309935037,0.314231179832004,0,0,0,0,0,0,0,0,0,1.24329698497822,0.6828739083758,1.38251932362818,2.15113679410139,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,1.94284397223656,0,0,0,0,0,0,7.17719670403885,0,0,2.20633489578515,0,0.196308467114945,0,0,0,0,0,0,4.10674058793012,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,262.277797738207,0.476128862927481,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,32.4397954366472,6.84466602170562,81.3612800416217,121.425693729801,25.614847454043,0.325613074443898,0,0,0,2.34640942403454,1.833621662743,3.66206560484165,9.98635161278269,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,4.14364450211533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,4.33883222481586,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0.188287601553558,0,3.36942951335251,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,38.9560320898918,0,0,0,0,0,0,0,20.7151151837561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0,0,0,0,3.20674611840788,50.9410711295137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8436437255907,0.796118080530053,5.49927130440263,0,0,0,0.202203398942031,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95984794828755,0,0,0,0,0,0,715.584963651558,0,2.93774963014692,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,21.6664547276226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0,0,0,0,0,4.46838880439127,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,3.96968942711435,0,1.91643641459393,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,7.69232309935037,0.314231179832004,0,0,0,0,0,0,0,0,0,1.24329698497822,0.6828739083758,1.38251932362818,2.15113679410139,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,1.94284397223656,0,0,0,0,0,0,7.17719670403885,0,0,2.20633489578515,0,0.196308467114945,0,0,0,0,0,0,4.10674058793012,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,262.277797738207,0.476128862927481,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,32.4397954366472,6.84466602170562,81.3612800416217,121.425693729801,25.614847454043,0.325613074443898,0,0,0,2.34640942403454,1.833621662743,3.66206560484165,9.98635161278269,0.201273793591026,0 | ||
|short_description=p1@CLCA4 | |||
}} | }} |
Latest revision as of 14:30, 19 September 2015
Short description: | p1@CLCA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLCA4_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000370563, NM_012128, NR_024602, uc009wcs.2, uc009wct.2, uc009wcu.2_5end |
EntrezGene: | CLCA4 |
HGNC: | 2018 |
UniProt: | Q14CN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.30e-13 | 118 |
orifice | 4.79e-13 | 36 |
open tracheal system trachea | 2.55e-12 | 2 |
endoderm-derived structure | 2.82e-11 | 160 |
endoderm | 2.82e-11 | 160 |
presumptive endoderm | 2.82e-11 | 160 |
digestive system | 2.72e-10 | 145 |
digestive tract | 2.72e-10 | 145 |
primitive gut | 2.72e-10 | 145 |
adult organism | 8.36e-09 | 114 |
tongue | 2.57e-08 | 3 |
gustatory system | 2.57e-08 | 3 |
future tongue | 2.57e-08 | 3 |
oral opening | 3.88e-08 | 22 |
saliva-secreting gland | 4.06e-08 | 6 |
gland of oral region | 4.06e-08 | 6 |
gland of foregut | 4.06e-08 | 6 |
oral gland | 4.06e-08 | 6 |
oral cavity | 4.06e-08 | 6 |
pharynx | 4.27e-08 | 11 |
trachea | 1.66e-07 | 7 |
respiratory airway | 1.66e-07 | 7 |
tonsil | 4.85e-07 | 1 |
mucosa-associated lymphoid tissue | 4.85e-07 | 1 |
lymphoid tissue | 4.85e-07 | 1 |
tonsillar ring | 4.85e-07 | 1 |
hindgut | 5.05e-07 | 19 |
vermiform appendix | 5.43e-07 | 1 |
caecum | 5.43e-07 | 1 |
midgut | 5.43e-07 | 1 |
vagina | 7.60e-07 | 1 |