FFCP PHASE1:Hg19::chr16:28898984..28898995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=487 | |EntrezGene=487 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=811 | |HGNC=811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=90bp_to_BX647368_5end | |association_with_transcript=90bp_to_BX647368_5end | ||
|cluster_id=chr16:28898984..28898995,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_4_at_ATP2A1_5end | |description=CAGE_peak_4_at_ATP2A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.37e-29;1!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2 | |ontology_enrichment_development_v019=UBERON:0004874;2.37e-29;1!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@ATP2A1 | |short_description=p4@ATP2A1 | ||
}} | }} |
Latest revision as of 01:31, 16 September 2015
Short description: | p4@ATP2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP2A1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 90bp_to_BX647368_5end |
EntrezGene: | ATP2A1 |
HGNC: | 811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.49e-38 | 3 |
gustatory system | 1.49e-38 | 3 |
future tongue | 1.49e-38 | 3 |
penis | 2.37e-29 | 1 |
intromittent organ | 2.37e-29 | 1 |
lateral plate mesenchyme | 2.37e-29 | 1 |
undifferentiated genital tubercle | 2.37e-29 | 1 |
somatopleure | 2.37e-29 | 1 |
surface | 3.16e-29 | 1 |
chest muscle | 4.20e-29 | 1 |
respiratory system muscle | 4.20e-29 | 1 |
skeletal muscle of trunk | 4.20e-29 | 1 |
respiratory system skeletal muscle | 4.20e-29 | 1 |
thoracic segment muscle | 4.20e-29 | 1 |
chest organ | 4.20e-29 | 1 |
muscle of trunk | 4.20e-29 | 1 |
diaphragm | 4.20e-29 | 1 |
future diaphragm | 4.20e-29 | 1 |
throat | 1.33e-15 | 2 |
muscle structure | 2.74e-15 | 2 |
muscle organ | 2.74e-15 | 2 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
zone of skin | 2.43e-08 | 4 |
pharyngeal arch system | 2.77e-07 | 18 |
upper respiratory tract | 6.01e-07 | 19 |