FFCP PHASE1:Hg19::chr1:160549235..160549303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8832 | |EntrezGene=8832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1704 | |HGNC=1704 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UIB8 | |UniProt=Q9UIB8 | ||
|association_with_transcript=0bp_to_ENST00000311224,ENST00000360056,ENST00000368047,ENST00000368048,ENST00000368051,ENST00000368054,uc001fwf.3,uc001fwg.3,uc001fwh.3,uc001fwi.3,uc001fwj.2,uc001fwk.2,uc009wtn.2_5end | |association_with_transcript=0bp_to_ENST00000311224,ENST00000360056,ENST00000368047,ENST00000368048,ENST00000368051,ENST00000368054,uc001fwf.3,uc001fwg.3,uc001fwh.3,uc001fwi.3,uc001fwj.2,uc001fwk.2,uc009wtn.2_5end | ||
|cluster_id=chr1:160549235..160549303,- | |||
|coexpression_cluster_id=C3892 | |coexpression_cluster_id=C3892 | ||
|description=CAGE_peak_1_at_CD84_5end | |description=CAGE_peak_1_at_CD84_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.74e-81!172;CL:0000566!1.74e-81!172;CL:0002032!8.21e-78!165;CL:0000837!8.21e-78!165;CL:0000988!4.39e-73!182;CL:0000738!7.95e-68!140;CL:0002031!8.00e-60!124;CL:0002087!1.60e-55!119;CL:0000763!1.00e-53!112;CL:0000049!1.00e-53!112;CL:0000766!1.67e-39!76;CL:0000557!5.48e-39!71;CL:0000839!1.39e-37!70;CL:0002009!5.54e-34!65;CL:0002194!1.07e-32!63;CL:0000576!1.07e-32!63;CL:0000040!1.07e-32!63;CL:0000559!1.07e-32!63;CL:0002057!1.62e-25!42;CL:0000860!2.86e-23!45;CL:0000542!8.98e-20!53;CL:0000051!8.98e-20!53;CL:0000838!2.74e-19!52;CL:0000134!9.80e-13!358;CL:0002320!1.49e-11!365;CL:0000791!3.59e-10!18;CL:0000789!3.59e-10!18;CL:0002420!3.59e-10!18;CL:0002419!3.59e-10!18;CL:0000790!3.59e-10!18;CL:0000945!9.00e-10!24;CL:0000826!9.00e-10!24;CL:0000084!1.24e-09!25;CL:0000827!1.24e-09!25;CL:0000625!9.08e-09!11;CL:0000219!7.27e-08!390;CL:0000451!8.15e-08!10;CL:0000236!1.53e-07!14;CL:0000990!1.93e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.74e-81!172;CL:0000566!1.74e-81!172;CL:0002032!8.21e-78!165;CL:0000837!8.21e-78!165;CL:0000988!4.39e-73!182;CL:0000738!7.95e-68!140;CL:0002031!8.00e-60!124;CL:0002087!1.60e-55!119;CL:0000763!1.00e-53!112;CL:0000049!1.00e-53!112;CL:0000766!1.67e-39!76;CL:0000557!5.48e-39!71;CL:0000839!1.39e-37!70;CL:0002009!5.54e-34!65;CL:0002194!1.07e-32!63;CL:0000576!1.07e-32!63;CL:0000040!1.07e-32!63;CL:0000559!1.07e-32!63;CL:0002057!1.62e-25!42;CL:0000860!2.86e-23!45;CL:0000542!8.98e-20!53;CL:0000051!8.98e-20!53;CL:0000838!2.74e-19!52;CL:0000134!9.80e-13!358;CL:0002320!1.49e-11!365;CL:0000791!3.59e-10!18;CL:0000789!3.59e-10!18;CL:0002420!3.59e-10!18;CL:0002419!3.59e-10!18;CL:0000790!3.59e-10!18;CL:0000945!9.00e-10!24;CL:0000826!9.00e-10!24;CL:0000084!1.24e-09!25;CL:0000827!1.24e-09!25;CL:0000625!9.08e-09!11;CL:0000219!7.27e-08!390;CL:0000451!8.15e-08!10;CL:0000236!1.53e-07!14;CL:0000990!1.93e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.13e-22;39!CL:0000234;1.13e-22;39!CL:0000860;1.38e-21;33!CL:0002057;1.38e-21;33!CL:0000576;6.17e-20;48!CL:0000766;1.84e-18;69!CL:0000763;2.85e-15;100!CL:0002087;3.12e-15;104!CL:0000738;6.47e-15;136!CL:0000988;3.01e-12;177!CL:0000542;1.42e-11;53!CL:0000791;1.67e-10;18!CL:0000789;1.67e-10;18!CL:0002419;1.67e-10;18!CL:0000945;4.53e-10;24!CL:0000625;5.09e-09;11!CL:0000084;1.08e-08;25!CL:0000451;5.08e-08;10!CL:0000990;1.26e-07;8!CL:0000236;1.79e-07;13!CL:0000235;6.10e-07;6 | |ontology_enrichment_celltype_v019=CL:0000473;1.13e-22;39!CL:0000234;1.13e-22;39!CL:0000860;1.38e-21;33!CL:0002057;1.38e-21;33!CL:0000576;6.17e-20;48!CL:0000766;1.84e-18;69!CL:0000763;2.85e-15;100!CL:0002087;3.12e-15;104!CL:0000738;6.47e-15;136!CL:0000988;3.01e-12;177!CL:0000542;1.42e-11;53!CL:0000791;1.67e-10;18!CL:0000789;1.67e-10;18!CL:0002419;1.67e-10;18!CL:0000945;4.53e-10;24!CL:0000625;5.09e-09;11!CL:0000084;1.08e-08;25!CL:0000451;5.08e-08;10!CL:0000990;1.26e-07;8!CL:0000236;1.79e-07;13!CL:0000235;6.10e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.44e-81,168;CL:0002032,1.94e-77,161;CL:0000837,1.94e-77,161;CL:0000988,1.15e-73,177;CL:0000738,1.47e-71,136;CL:0002031,2.51e-63,120;CL:0002087,7.70e-59,115;CL:0000763,2.43e-54,108;CL:0000049,2.43e-54,108;CL:0000766,3.39e-44,72;CL:0000557,7.86e-44,67;CL:0000839,2.58e-42,66;CL:0002009,1.57e-38,61;CL:0002194,3.47e-37,59;CL:0000576,3.47e-37,59;CL:0000040,3.47e-37,59;CL:0000559,3.47e-37,59;CL:0000473,9.89e-32,48;CL:0000234,9.89e-32,48;CL:0000860,2.52e-26,42;CL:0002057,2.52e-26,42;CL:0000542,3.75e-19,53;CL:0000051,3.75e-19,53;CL:0000838,1.17e-18,52;CL:0000134,3.53e-12,354;CL:0002320,4.57e-11,361;CL:0000791,1.72e-10,18;CL:0000789,1.72e-10,18;CL:0002420,1.72e-10,18;CL:0002419,1.72e-10,18;CL:0000790,1.72e-10,18;CL:0000945,4.24e-10,24;CL:0000826,4.24e-10,24;CL:0000625,5.19e-09,11;CL:0000084,1.07e-08,25;CL:0000827,1.07e-08,25;CL:0000451,5.01e-08,10;CL:0000236,9.64e-08,14;CL:0000990,1.22e-07,8;CL:0000219,2.04e-07,386;CL:0000235,6.11e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-19;42!CL:0000049;7.88e-15;108!CL:0000051;1.42e-11;53!CL:0000790;1.67e-10;18 | |ontology_enrichment_development_v019=CL:0002057;2.27e-19;42!CL:0000049;7.88e-15;108!CL:0000051;1.42e-11;53!CL:0000790;1.67e-10;18 | ||
|ontology_enrichment_disease=DOID:1240!6.45e-12!39;DOID:2531!2.66e-11!51;DOID:0060083!2.66e-11!51;DOID:8692!3.58e-11!31 | |ontology_enrichment_disease=DOID:1240!6.45e-12!39;DOID:2531!2.66e-11!51;DOID:0060083!2.66e-11!51;DOID:8692!3.58e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.67e-08;31!DOID:1240;3.35e-07;39 | |ontology_enrichment_disease_v019=DOID:8692;4.67e-08;31!DOID:1240;3.35e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,1.70e-08,31;DOID:1240,1.80e-08,39;DOID:2531,1.96e-08,51;DOID:0060083,1.96e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-40!102;UBERON:0003061!1.79e-40!102;UBERON:0002193!5.40e-36!112;UBERON:0002371!4.37e-33!80;UBERON:0007023!9.23e-33!115;UBERON:0001474!1.43e-28!86;UBERON:0002405!1.76e-24!115;UBERON:0004765!3.66e-21!101;UBERON:0001434!3.66e-21!101;UBERON:0002384!1.94e-10!375;UBERON:0001049!2.12e-09!57;UBERON:0005068!2.12e-09!57;UBERON:0006241!2.12e-09!57;UBERON:0007135!2.12e-09!57;UBERON:0003081!2.09e-08!216;UBERON:0003080!1.25e-07!42;UBERON:0002780!2.19e-07!41;UBERON:0001890!2.19e-07!41;UBERON:0006240!2.19e-07!41;UBERON:0002616!4.47e-07!59 | |ontology_enrichment_uberon=UBERON:0002390!1.79e-40!102;UBERON:0003061!1.79e-40!102;UBERON:0002193!5.40e-36!112;UBERON:0002371!4.37e-33!80;UBERON:0007023!9.23e-33!115;UBERON:0001474!1.43e-28!86;UBERON:0002405!1.76e-24!115;UBERON:0004765!3.66e-21!101;UBERON:0001434!3.66e-21!101;UBERON:0002384!1.94e-10!375;UBERON:0001049!2.12e-09!57;UBERON:0005068!2.12e-09!57;UBERON:0006241!2.12e-09!57;UBERON:0007135!2.12e-09!57;UBERON:0003081!2.09e-08!216;UBERON:0003080!1.25e-07!42;UBERON:0002780!2.19e-07!41;UBERON:0001890!2.19e-07!41;UBERON:0006240!2.19e-07!41;UBERON:0002616!4.47e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.75e-09;114 | |ontology_enrichment_uberon_v019=UBERON:0007023;5.75e-09;114 | ||
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| ||
|short_description=p1@CD84 | |short_description=p1@CD84 | ||
}} | }} |
Latest revision as of 02:33, 18 September 2015
Short description: | p1@CD84 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD84_5end |
Coexpression cluster: | C3892_Mast_Macrophage_Monocytederived_CD14_Dendritic_acute_chronic |
Association with transcript: | 0bp_to_ENST00000311224, ENST00000360056, ENST00000368047, ENST00000368048, ENST00000368051, ENST00000368054, uc001fwf.3, uc001fwg.3, uc001fwh.3, uc001fwi.3, uc001fwj.2, uc001fwk.2, uc009wtn.2_5end |
EntrezGene: | CD84 |
HGNC: | 1704 |
UniProt: | Q9UIB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.84e-44 | 98 |
blood island | 4.84e-44 | 98 |
hemolymphoid system | 3.07e-39 | 108 |
bone marrow | 2.11e-36 | 76 |
immune system | 6.40e-34 | 93 |
adult organism | 5.77e-33 | 114 |
bone element | 1.72e-31 | 82 |
skeletal element | 4.68e-26 | 90 |
skeletal system | 2.30e-21 | 100 |
lateral plate mesoderm | 4.42e-11 | 203 |
connective tissue | 4.91e-10 | 371 |
neural tube | 1.59e-09 | 56 |
neural rod | 1.59e-09 | 56 |
future spinal cord | 1.59e-09 | 56 |
neural keel | 1.59e-09 | 56 |
regional part of nervous system | 1.68e-08 | 53 |
regional part of brain | 1.68e-08 | 53 |
regional part of forebrain | 1.20e-07 | 41 |
forebrain | 1.20e-07 | 41 |
anterior neural tube | 1.20e-07 | 41 |
future forebrain | 1.20e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.70e-08 | 31 |
leukemia | 1.80e-08 | 39 |
hematologic cancer | 1.96e-08 | 51 |
immune system cancer | 1.96e-08 | 51 |