FFCP PHASE1:Hg19::chr1:78392475..78392503,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:78392475..78392503,+
|short_description=p9@NEXN
|description=CAGE_peak_9_at_NEXN_5end
|association_with_transcript=221bp_to_ENST00000464998_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=221bp_to_ENST00000464998_5end | |||
|cluster_id=chr1:78392475..78392503,+ | |||
|description=CAGE_peak_9_at_NEXN_5end | |||
|id=chr1:78392475..78392503,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.99e-15!42;CL:0000860!2.21e-13!45;CL:0002194!1.18e-11!63;CL:0000576!1.18e-11!63;CL:0000040!1.18e-11!63;CL:0000559!1.18e-11!63;CL:0002009!7.09e-11!65;CL:0000839!1.26e-09!70;CL:0000557!2.62e-09!71;CL:0002087!2.38e-08!119;CL:0000766!2.50e-08!76;CL:0000763!7.13e-08!112;CL:0000049!7.13e-08!112;CL:0000037!4.86e-07!172;CL:0000566!4.86e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-08;33!CL:0002057;1.36e-08;33!CL:0002097;3.46e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.10e-08,115;CL:0002032,1.15e-08,161;CL:0000837,1.15e-08,161;CL:0002097,3.01e-08,2;CL:0002031,3.96e-08,120;CL:0000988,4.03e-08,177;CL:0000037,4.63e-08,168;CL:0000860,6.66e-07,42;CL:0002057,6.66e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1240;1.49e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.17e-08,39;DOID:2531,1.77e-07,51;DOID:0060083,1.77e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.11e-08!80;UBERON:0001474!3.11e-07!86;UBERON:0004765!3.78e-07!101;UBERON:0001434!3.78e-07!101;UBERON:0002390!9.20e-07!102;UBERON:0003061!9.20e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@NEXN | |||
}} | }} |
Latest revision as of 07:43, 19 September 2015
Short description: | p9@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NEXN_5end |
Coexpression cluster: | NA |
Association with transcript: | 221bp_to_ENST00000464998_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.10e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.15e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-08 | 161 |
cortical cell of adrenal gland | 3.01e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 3.96e-08 | 120 |
hematopoietic cell | 4.03e-08 | 177 |
hematopoietic stem cell | 4.63e-08 | 168 |
classical monocyte | 6.66e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.66e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.17e-08 | 39 |
hematologic cancer | 1.77e-07 | 51 |
immune system cancer | 1.77e-07 | 51 |