FFCP PHASE1:Hg19::chr22:20103644..20103662,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5902 | |EntrezGene=5902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9847 | |HGNC=9847 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUP2,C9JDM3,F8WCY3 | |UniProt=B3KUP2,C9JDM3,F8WCY3 | ||
|association_with_transcript=183bp_to_ENST00000430524,ENST00000432879,ENST00000435265_5end | |association_with_transcript=183bp_to_ENST00000430524,ENST00000432879,ENST00000435265_5end | ||
|cluster_id=chr22:20103644..20103662,+ | |||
|coexpression_cluster_id=C559 | |coexpression_cluster_id=C559 | ||
|description=CAGE_peak_10_at_RANBP1_5end | |description=CAGE_peak_10_at_RANBP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!1.26e-12!9 | |ontology_enrichment_celltype=CL:0000188!1.26e-12!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;3.55e-44;9!CL:0002575;9.40e-14;2!CL:0000669;1.59e-07;4 | |ontology_enrichment_celltype_v019=CL:0000188;3.55e-44;9!CL:0002575;9.40e-14;2!CL:0000669;1.59e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.55e-44,9;CL:0002575,9.40e-14,2;CL:0000187,1.22e-07,55;CL:0000669,1.59e-07,4;CL:0000680,2.90e-07,58;CL:0000056,2.90e-07,58;CL:0000355,2.90e-07,58;CL:0000393,6.36e-07,61;CL:0000211,6.36e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.60e-39;16!UBERON:0002036;7.60e-39;16!UBERON:0002385;1.75e-19;31!UBERON:0001015;1.75e-19;31!UBERON:0000383;1.75e-19;31!UBERON:0000341;1.29e-13;2 | |ontology_enrichment_uberon_v019=UBERON:0001134;7.60e-39;16!UBERON:0002036;7.60e-39;16!UBERON:0002385;1.75e-19;31!UBERON:0001015;1.75e-19;31!UBERON:0000383;1.75e-19;31!UBERON:0000341;1.29e-13;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.37e-13,2;UBERON:0001134,2.83e-10,62;UBERON:0002036,2.83e-10,62;UBERON:0003082,2.83e-10,62;UBERON:0002385,5.84e-10,64;UBERON:0001015,5.84e-10,64;UBERON:0000383,5.84e-10,64;UBERON:0002329,5.35e-09,71;UBERON:0003059,5.35e-09,71;UBERON:0007282,5.35e-09,71;UBERON:0004290,5.35e-09,71;UBERON:0009618,5.35e-09,71;UBERON:0003077,7.10e-09,72;UBERON:0007285,7.10e-09,72;UBERON:0007524,9.34e-09,73;UBERON:0007503,3.31e-08,78;UBERON:0000486,1.01e-07,83 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,3.43143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54352375972973,0.308097234229289,1.07452572308291,1.65403886981437,0,0.145016693914229,0.852266274161009,4.18450567539666,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.743212700502875,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0.335643173951685,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0.307988420568741,5.799072156691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0,0,0,0,0,1.42838658878244,0,0,0,0,0.202117188958219,0,0.684466602170562,0.0673520530145875,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 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| ||
|short_description=p10@RANBP1 | |short_description=p10@RANBP1 | ||
}} | }} |
Latest revision as of 04:24, 19 September 2015
Short description: | p10@RANBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RANBP1_5end |
Coexpression cluster: | C559_Skeletal_Pericytes_mesenchymal_Myoblast_rhabdomyosarcoma_skeletal_tongue |
Association with transcript: | 183bp_to_ENST00000430524, ENST00000432879, ENST00000435265_5end |
EntrezGene: | RANBP1 |
HGNC: | 9847 |
UniProt: | B3KUP2C9JDM3F8WCY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.55e-44 | 9 |
central nervous system pericyte | 9.40e-14 | 2 |
muscle cell | 1.22e-07 | 55 |
pericyte cell | 1.59e-07 | 4 |
muscle precursor cell | 2.90e-07 | 58 |
myoblast | 2.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-07 | 58 |
electrically responsive cell | 6.36e-07 | 61 |
electrically active cell | 6.36e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
throat | 1.37e-13 | 2 |
skeletal muscle tissue | 2.83e-10 | 62 |
striated muscle tissue | 2.83e-10 | 62 |
myotome | 2.83e-10 | 62 |
muscle tissue | 5.84e-10 | 64 |
musculature | 5.84e-10 | 64 |
musculature of body | 5.84e-10 | 64 |
somite | 5.35e-09 | 71 |
presomitic mesoderm | 5.35e-09 | 71 |
presumptive segmental plate | 5.35e-09 | 71 |
dermomyotome | 5.35e-09 | 71 |
trunk paraxial mesoderm | 5.35e-09 | 71 |
paraxial mesoderm | 7.10e-09 | 72 |
presumptive paraxial mesoderm | 7.10e-09 | 72 |
dense mesenchyme tissue | 9.34e-09 | 73 |
epithelial vesicle | 3.31e-08 | 78 |
multilaminar epithelium | 1.01e-07 | 83 |