FFCP PHASE1:Hg19::chr11:65623641..65623682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1072 | |EntrezGene=1072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1874 | |HGNC=1874 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQB7 | |UniProt=E9PQB7 | ||
|association_with_transcript=261bp_to_ENST00000530413_5end | |association_with_transcript=261bp_to_ENST00000530413_5end | ||
|cluster_id=chr11:65623641..65623682,- | |||
|coexpression_cluster_id=C3188 | |coexpression_cluster_id=C3188 | ||
|description=CAGE_peak_4_at_CFL1_5end | |description=CAGE_peak_4_at_CFL1_5end | ||
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|ontology_enrichment_celltype=CL:0002371!4.30e-16!591;CL:0000144!1.73e-15!625;CL:0000003!1.81e-13!722;CL:0000548!3.41e-13!679;CL:0000004!3.41e-13!679;CL:0000255!3.41e-13!679;CL:0002057!3.81e-13!42;CL:0000012!1.38e-12!682;CL:0000860!5.36e-12!45;CL:0000723!2.59e-11!436;CL:0000034!2.62e-11!444;CL:0000048!4.42e-11!430;CL:0000222!4.82e-11!119;CL:0002009!1.67e-09!65;CL:0002194!2.38e-09!63;CL:0000576!2.38e-09!63;CL:0000040!2.38e-09!63;CL:0000559!2.38e-09!63;CL:0000393!1.86e-08!60;CL:0000211!1.86e-08!60;CL:0002321!3.37e-08!248;CL:0000220!4.46e-08!246;CL:0000766!9.11e-08!76;CL:0000183!1.14e-07!59;CL:0000680!1.55e-07!57;CL:0000056!1.55e-07!57;CL:0000355!1.55e-07!57;CL:0000187!3.18e-07!54;CL:0000557!3.33e-07!71;CL:0000055!5.38e-07!180;CL:0000192!5.84e-07!42;CL:0000514!5.84e-07!42;CL:0000063!8.29e-07!578;CL:0000839!9.15e-07!70 | |ontology_enrichment_celltype=CL:0002371!4.30e-16!591;CL:0000144!1.73e-15!625;CL:0000003!1.81e-13!722;CL:0000548!3.41e-13!679;CL:0000004!3.41e-13!679;CL:0000255!3.41e-13!679;CL:0002057!3.81e-13!42;CL:0000012!1.38e-12!682;CL:0000860!5.36e-12!45;CL:0000723!2.59e-11!436;CL:0000034!2.62e-11!444;CL:0000048!4.42e-11!430;CL:0000222!4.82e-11!119;CL:0002009!1.67e-09!65;CL:0002194!2.38e-09!63;CL:0000576!2.38e-09!63;CL:0000040!2.38e-09!63;CL:0000559!2.38e-09!63;CL:0000393!1.86e-08!60;CL:0000211!1.86e-08!60;CL:0002321!3.37e-08!248;CL:0000220!4.46e-08!246;CL:0000766!9.11e-08!76;CL:0000183!1.14e-07!59;CL:0000680!1.55e-07!57;CL:0000056!1.55e-07!57;CL:0000355!1.55e-07!57;CL:0000187!3.18e-07!54;CL:0000557!3.33e-07!71;CL:0000055!5.38e-07!180;CL:0000192!5.84e-07!42;CL:0000514!5.84e-07!42;CL:0000063!8.29e-07!578;CL:0000839!9.15e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-11;33!CL:0002057;1.22e-11;33!CL:0000473;5.39e-11;39!CL:0000234;5.39e-11;39 | |ontology_enrichment_celltype_v019=CL:0000860;1.22e-11;33!CL:0002057;1.22e-11;33!CL:0000473;5.39e-11;39!CL:0000234;5.39e-11;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.51e-14,48;CL:0000234,1.51e-14,48;CL:0000860,3.22e-13,42;CL:0002057,3.22e-13,42;CL:0000034,1.10e-11,441;CL:0000723,1.23e-11,433;CL:0000222,1.77e-11,121;CL:0000048,2.10e-11,427;CL:0002009,8.60e-11,61;CL:0002194,1.19e-10,59;CL:0000576,1.19e-10,59;CL:0000040,1.19e-10,59;CL:0000559,1.19e-10,59;CL:0000766,7.89e-09,72;CL:0000393,1.47e-08,61;CL:0000211,1.47e-08,61;CL:0002321,2.41e-08,250;CL:0000557,2.46e-08,67;CL:0000839,7.92e-08,66;CL:0000680,1.24e-07,58;CL:0000056,1.24e-07,58;CL:0000355,1.24e-07,58;CL:0000187,2.55e-07,55;CL:0000192,4.12e-07,43;CL:0000514,4.12e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;4.54e-10;42 | |ontology_enrichment_development_v019=CL:0002057;4.54e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.78e-11!167;UBERON:0003081!1.28e-10!216;UBERON:0000914!9.39e-09!83;UBERON:0002329!9.39e-09!83;UBERON:0003077!9.39e-09!83;UBERON:0003059!9.39e-09!83;UBERON:0007282!9.39e-09!83;UBERON:0009618!9.39e-09!83;UBERON:0007285!9.39e-09!83;UBERON:0001981!4.32e-08!60;UBERON:0007500!4.32e-08!60;UBERON:0004537!4.32e-08!60;UBERON:0006965!4.32e-08!60;UBERON:0001637!4.42e-08!42;UBERON:0003509!4.42e-08!42;UBERON:0004572!4.42e-08!42;UBERON:0004290!5.08e-08!70;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0000055!1.85e-07!69;UBERON:0002371!2.90e-07!80;UBERON:0004872!5.42e-07!84 | |ontology_enrichment_uberon=UBERON:0002204!1.78e-11!167;UBERON:0003081!1.28e-10!216;UBERON:0000914!9.39e-09!83;UBERON:0002329!9.39e-09!83;UBERON:0003077!9.39e-09!83;UBERON:0003059!9.39e-09!83;UBERON:0007282!9.39e-09!83;UBERON:0009618!9.39e-09!83;UBERON:0007285!9.39e-09!83;UBERON:0001981!4.32e-08!60;UBERON:0007500!4.32e-08!60;UBERON:0004537!4.32e-08!60;UBERON:0006965!4.32e-08!60;UBERON:0001637!4.42e-08!42;UBERON:0003509!4.42e-08!42;UBERON:0004572!4.42e-08!42;UBERON:0004290!5.08e-08!70;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0000055!1.85e-07!69;UBERON:0002371!2.90e-07!80;UBERON:0004872!5.42e-07!84 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p4@CFL1 | |short_description=p4@CFL1 | ||
}} | }} |
Latest revision as of 11:17, 19 September 2015
Short description: | p4@CFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CFL1_5end |
Coexpression cluster: | C3188_Smooth_Aortic_Alveolar_leiomyoma_iPS_Fibroblast_mesenchymal |
Association with transcript: | 261bp_to_ENST00000530413_5end |
EntrezGene: | CFL1 |
HGNC: | 1874 |
UniProt: | E9PQB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.51e-14 | 48 |
phagocyte | 1.51e-14 | 48 |
classical monocyte | 3.22e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.22e-13 | 42 |
stem cell | 1.10e-11 | 441 |
somatic stem cell | 1.23e-11 | 433 |
mesodermal cell | 1.77e-11 | 121 |
multi fate stem cell | 2.10e-11 | 427 |
macrophage dendritic cell progenitor | 8.60e-11 | 61 |
monopoietic cell | 1.19e-10 | 59 |
monocyte | 1.19e-10 | 59 |
monoblast | 1.19e-10 | 59 |
promonocyte | 1.19e-10 | 59 |
myeloid leukocyte | 7.89e-09 | 72 |
electrically responsive cell | 1.47e-08 | 61 |
electrically active cell | 1.47e-08 | 61 |
embryonic cell | 2.41e-08 | 250 |
granulocyte monocyte progenitor cell | 2.46e-08 | 67 |
myeloid lineage restricted progenitor cell | 7.92e-08 | 66 |
muscle precursor cell | 1.24e-07 | 58 |
myoblast | 1.24e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-07 | 58 |
muscle cell | 2.55e-07 | 55 |
smooth muscle cell | 4.12e-07 | 43 |
smooth muscle myoblast | 4.12e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.14e-11 | 167 |
lateral plate mesoderm | 6.33e-11 | 203 |
epithelial vesicle | 4.02e-10 | 78 |
mesoderm | 4.33e-09 | 315 |
mesoderm-derived structure | 4.33e-09 | 315 |
presumptive mesoderm | 4.33e-09 | 315 |
epithelial tube open at both ends | 1.63e-08 | 59 |
blood vessel | 1.63e-08 | 59 |
blood vasculature | 1.63e-08 | 59 |
vascular cord | 1.63e-08 | 59 |
dense mesenchyme tissue | 2.16e-08 | 73 |
bone marrow | 3.02e-08 | 76 |
artery | 3.67e-08 | 42 |
arterial blood vessel | 3.67e-08 | 42 |
arterial system | 3.67e-08 | 42 |
somite | 3.84e-08 | 71 |
presomitic mesoderm | 3.84e-08 | 71 |
presumptive segmental plate | 3.84e-08 | 71 |
dermomyotome | 3.84e-08 | 71 |
trunk paraxial mesoderm | 3.84e-08 | 71 |
paraxial mesoderm | 4.39e-08 | 72 |
presumptive paraxial mesoderm | 4.39e-08 | 72 |
vasculature | 7.54e-08 | 78 |
vascular system | 7.54e-08 | 78 |
vessel | 8.88e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 2.85e-07 | 83 |
bone element | 4.00e-07 | 82 |