FFCP PHASE1:Hg19::chr1:153518453..153518470,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6275 | |EntrezGene=6275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10494 | |HGNC=10494 | ||
|TSSclassifier=strong | |||
|UniProt=P26447 | |UniProt=P26447 | ||
|association_with_transcript=-92bp_to_ENST00000368716_5end | |association_with_transcript=-92bp_to_ENST00000368716_5end | ||
|cluster_id=chr1:153518453..153518470,- | |||
|description=CAGE_peak_10_at_S100A4_5end | |description=CAGE_peak_10_at_S100A4_5end | ||
|id=chr1:153518453..153518470,- | |id=chr1:153518453..153518470,- | ||
|ontology_enrichment_celltype=CL:0000084!1.21e-11!25;CL:0000827!1.21e-11!25;CL:0002320!5.94e-11!365;CL:0000134!7.57e-11!358;CL:0000791!3.54e-09!18;CL:0000789!3.54e-09!18;CL:0002420!3.54e-09!18;CL:0002419!3.54e-09!18;CL:0000790!3.54e-09!18;CL:0002620!5.31e-09!23;CL:0000219!2.21e-08!390;CL:0000057!5.32e-08!75;CL:0000723!3.93e-07!436;CL:0000048!5.22e-07!430;CL:0000034!6.44e-07!444;CL:0000542!8.25e-07!53;CL:0000051!8.25e-07!53;CL:0000625!8.43e-07!11 | |ontology_enrichment_celltype=CL:0000084!1.21e-11!25;CL:0000827!1.21e-11!25;CL:0002320!5.94e-11!365;CL:0000134!7.57e-11!358;CL:0000791!3.54e-09!18;CL:0000789!3.54e-09!18;CL:0002420!3.54e-09!18;CL:0002419!3.54e-09!18;CL:0000790!3.54e-09!18;CL:0002620!5.31e-09!23;CL:0000219!2.21e-08!390;CL:0000057!5.32e-08!75;CL:0000723!3.93e-07!436;CL:0000048!5.22e-07!430;CL:0000034!6.44e-07!444;CL:0000542!8.25e-07!53;CL:0000051!8.25e-07!53;CL:0000625!8.43e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.48e-14;6!CL:0000098;1.48e-14;6!CL:0002167;1.48e-14;6!CL:0000346;5.46e-13;3!CL:1000428;5.46e-13;3!CL:0000895;2.28e-10;1!CL:0002559;3.78e-08;5 | |ontology_enrichment_celltype_v019=CL:0000197;1.48e-14;6!CL:0000098;1.48e-14;6!CL:0002167;1.48e-14;6!CL:0000346;5.46e-13;3!CL:1000428;5.46e-13;3!CL:0000895;2.28e-10;1!CL:0002559;3.78e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.38e-14,6;CL:0000098,1.38e-14,6;CL:0002167,1.38e-14,6;CL:0000346,2.47e-13,3;CL:1000428,2.47e-13,3;CL:0000810,2.28e-10,1;CL:0000895,2.28e-10,1;CL:0002436,2.28e-10,1;CL:0002427,2.28e-10,1;CL:0002428,2.28e-10,1;CL:0002429,2.28e-10,1;CL:0002433,2.28e-10,1;CL:0002431,2.28e-10,1;CL:0002432,2.28e-10,1;CL:0002559,2.36e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002427;2.28e-10;1 | |ontology_enrichment_development_v019=CL:0002427;2.28e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.20e-10!9;UBERON:0002384!2.65e-10!375;UBERON:0001557!8.67e-08!19 | |ontology_enrichment_uberon=UBERON:0001737!1.20e-10!9;UBERON:0002384!2.65e-10!375;UBERON:0001557!8.67e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.46e-13;3!UBERON:0001992;5.46e-13;3!UBERON:0001737;1.37e-09;9!UBERON:0001557;1.37e-09;9!UBERON:0002073;3.78e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000412;5.46e-13;3!UBERON:0001992;5.46e-13;3!UBERON:0001737;1.37e-09;9!UBERON:0001557;1.37e-09;9!UBERON:0002073;3.78e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.47e-13,3;UBERON:0001992,2.47e-13,3;UBERON:0001737,1.33e-09,9;UBERON:0002073,2.36e-08,5;UBERON:0005086,2.36e-08,5;UBERON:0001557,8.30e-08,19 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0.205601498999509,0.83593247695339,0.32592226663359,0,0,0.222820913770347,0.589211814949674,0.886135578334485,1.08321545506006,0.25618263945135,0.520237390239513,0,0.276350017785848,0,0,0.267540828089713,0,0.226618685395132,1.14966148080576,1.03088233644789,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,1.05402583354441,0.511946444617674,3.74792179657038,0.473554504088034,0,0,0,0.434473211648397,0,0,0,0,0,0,0,1.45990461090791,0.0945348171640679,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.448346041655403,0.587172493218824,0,0.280901613404497,0.408308342509787,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.675105328965065,0.487185025805993,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,0,0.464367928031979,0,1.0647612003586,0.168584690078102,0.482022059766964,0.772057809126758,0.217879444092406,1.18635309555548,0.808987848960987,1.37355025587742,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0.537182889719687,0.112085143993527,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.49800584316026,0.788512075169673,3.5142424497814,0.300946099727719,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0.371606350251437,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0.50787533340481,0,0.201799707191048,0,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,0,0,0.557216921387392,0,0.47748896947538,0.296964680832639,0.921482106297696,0,0,0,0,0.63337622438398,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0.498635045700469,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0.51595809741485,0.677294319023596,0.292357268344742,0.328461828212837,0,0,0,0,0,0,0,0,0,0.19980960958213,0.432271251462318,0,0,0,0,0,0.135904206073614,0.941425616810999,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0.342173675768659,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,2.48165108531456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0,0.33639558774184,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0.406896178315738,0.665756774185513,0,0 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| ||
|short_description=p10@S100A4 | |short_description=p10@S100A4 | ||
}} | }} |
Latest revision as of 05:48, 17 September 2015
Short description: | p10@S100A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_S100A4_5end |
Coexpression cluster: | NA |
Association with transcript: | -92bp_to_ENST00000368716_5end |
EntrezGene: | S100A4 |
HGNC: | 10494 |
UniProt: | P26447 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.38e-14 | 6 |
sensory epithelial cell | 1.38e-14 | 6 |
olfactory epithelial cell | 1.38e-14 | 6 |
hair follicle dermal papilla cell | 2.47e-13 | 3 |
stem cell of epidermis | 2.47e-13 | 3 |
CD4-positive, alpha-beta thymocyte | 2.28e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.28e-10 | 1 |
mature CD4 single-positive thymocyte | 2.28e-10 | 1 |
resting double-positive thymocyte | 2.28e-10 | 1 |
double-positive blast | 2.28e-10 | 1 |
CD69-positive double-positive thymocyte | 2.28e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.28e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.28e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.28e-10 | 1 |
hair follicle cell | 2.36e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.47e-13 | 3 |
papillary layer of dermis | 2.47e-13 | 3 |
larynx | 1.33e-09 | 9 |
hair follicle | 2.36e-08 | 5 |
hair follicle placode | 2.36e-08 | 5 |
upper respiratory tract | 8.30e-08 | 19 |