FFCP PHASE1:Hg19::chr3:18486354..18486377,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6304 | |EntrezGene=6304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10541 | |HGNC=10541 | ||
|TSSclassifier=strong | |||
|UniProt=C9JP21 | |UniProt=C9JP21 | ||
|association_with_transcript=0bp_to_ENST00000440737,ENST00000493952_5end | |association_with_transcript=0bp_to_ENST00000440737,ENST00000493952_5end | ||
|cluster_id=chr3:18486354..18486377,- | |||
|coexpression_cluster_id=C712 | |coexpression_cluster_id=C712 | ||
|description=CAGE_peak_2_at_SATB1_5end | |description=CAGE_peak_2_at_SATB1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!9.10e-36!172;CL:0000566!9.10e-36!172;CL:0000988!6.10e-33!182;CL:0002032!4.87e-32!165;CL:0000837!4.87e-32!165;CL:0000738!5.32e-28!140;CL:0002087!2.78e-23!119;CL:0002031!4.28e-22!124;CL:0000763!1.03e-16!112;CL:0000049!1.03e-16!112;CL:0000838!2.79e-15!52;CL:0000542!5.29e-15!53;CL:0000051!5.29e-15!53;CL:0000084!2.66e-14!25;CL:0000827!2.66e-14!25;CL:0000791!4.33e-12!18;CL:0000789!4.33e-12!18;CL:0002420!4.33e-12!18;CL:0002419!4.33e-12!18;CL:0000790!4.33e-12!18;CL:0000766!9.90e-12!76;CL:0000557!2.56e-09!71;CL:0000839!1.12e-08!70;CL:0000625!3.45e-08!11;CL:0002057!3.81e-08!42;CL:0002194!5.11e-08!63;CL:0000576!5.11e-08!63;CL:0000040!5.11e-08!63;CL:0000559!5.11e-08!63;CL:0002009!1.04e-07!65;CL:0000236!2.05e-07!14 | |ontology_enrichment_celltype=CL:0000037!9.10e-36!172;CL:0000566!9.10e-36!172;CL:0000988!6.10e-33!182;CL:0002032!4.87e-32!165;CL:0000837!4.87e-32!165;CL:0000738!5.32e-28!140;CL:0002087!2.78e-23!119;CL:0002031!4.28e-22!124;CL:0000763!1.03e-16!112;CL:0000049!1.03e-16!112;CL:0000838!2.79e-15!52;CL:0000542!5.29e-15!53;CL:0000051!5.29e-15!53;CL:0000084!2.66e-14!25;CL:0000827!2.66e-14!25;CL:0000791!4.33e-12!18;CL:0000789!4.33e-12!18;CL:0002420!4.33e-12!18;CL:0002419!4.33e-12!18;CL:0000790!4.33e-12!18;CL:0000766!9.90e-12!76;CL:0000557!2.56e-09!71;CL:0000839!1.12e-08!70;CL:0000625!3.45e-08!11;CL:0002057!3.81e-08!42;CL:0002194!5.11e-08!63;CL:0000576!5.11e-08!63;CL:0000040!5.11e-08!63;CL:0000559!5.11e-08!63;CL:0002009!1.04e-07!65;CL:0000236!2.05e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.94e-17;25!CL:0000791;1.96e-14;18!CL:0000789;1.96e-14;18!CL:0002419;1.96e-14;18!CL:0000542;4.38e-12;53!CL:0000625;1.19e-09;11!CL:0002087;3.20e-09;104!CL:0000236;4.68e-08;13!CL:0000763;6.76e-08;100!CL:0000738;7.03e-08;136!CL:0000988;1.51e-07;177!CL:0000860;2.08e-07;33!CL:0002057;2.08e-07;33!CL:0000576;8.04e-07;48 | |ontology_enrichment_celltype_v019=CL:0000084;1.94e-17;25!CL:0000791;1.96e-14;18!CL:0000789;1.96e-14;18!CL:0002419;1.96e-14;18!CL:0000542;4.38e-12;53!CL:0000625;1.19e-09;11!CL:0002087;3.20e-09;104!CL:0000236;4.68e-08;13!CL:0000763;6.76e-08;100!CL:0000738;7.03e-08;136!CL:0000988;1.51e-07;177!CL:0000860;2.08e-07;33!CL:0002057;2.08e-07;33!CL:0000576;8.04e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.65e-42,168;CL:0000988,3.22e-40,177;CL:0002032,5.76e-38,161;CL:0000837,5.76e-38,161;CL:0000738,6.65e-33,136;CL:0002087,1.13e-27,115;CL:0002031,1.70e-26,120;CL:0000838,1.64e-19,52;CL:0000542,8.57e-19,53;CL:0000051,8.57e-19,53;CL:0000763,9.54e-19,108;CL:0000049,9.54e-19,108;CL:0000084,1.98e-17,25;CL:0000827,1.98e-17,25;CL:0000791,1.99e-14,18;CL:0000789,1.99e-14,18;CL:0002420,1.99e-14,18;CL:0002419,1.99e-14,18;CL:0000790,1.99e-14,18;CL:0000766,5.43e-13,72;CL:0000557,3.10e-10,67;CL:0000625,1.16e-09,11;CL:0000839,3.31e-09,66;CL:0002194,1.55e-08,59;CL:0000576,1.55e-08,59;CL:0000040,1.55e-08,59;CL:0000559,1.55e-08,59;CL:0000236,2.47e-08,14;CL:0002009,2.66e-08,61;CL:0000860,1.10e-07,42;CL:0002057,1.10e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;1.96e-14;18!CL:0000051;4.38e-12;53 | |ontology_enrichment_development_v019=CL:0000790;1.96e-14;18!CL:0000051;4.38e-12;53 | ||
|ontology_enrichment_disease=DOID:1240!4.08e-10!39;DOID:2531!5.16e-10!51;DOID:0060083!5.16e-10!51;DOID:8692!7.24e-09!31 | |ontology_enrichment_disease=DOID:1240!4.08e-10!39;DOID:2531!5.16e-10!51;DOID:0060083!5.16e-10!51;DOID:8692!7.24e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.10e-10;31!DOID:1240;2.44e-09;39!DOID:2531;8.73e-09;51!DOID:0060083;8.73e-09;51 | |ontology_enrichment_disease_v019=DOID:8692;1.10e-10;31!DOID:1240;2.44e-09;39!DOID:2531;8.73e-09;51!DOID:0060083;8.73e-09;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.49e-12,51;DOID:0060083,1.49e-12,51;DOID:1240,5.65e-12,39;DOID:8692,7.10e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.29e-15!102;UBERON:0003061!8.29e-15!102;UBERON:0007023!1.04e-12!115;UBERON:0002193!3.72e-12!112;UBERON:0000178!2.38e-08!15;UBERON:0000179!2.38e-08!15;UBERON:0000463!2.38e-08!15;UBERON:0002371!1.27e-07!80;UBERON:0001474!5.14e-07!86;UBERON:0002619!6.01e-07!22;UBERON:0001950!8.44e-07!20 | |ontology_enrichment_uberon=UBERON:0002390!8.29e-15!102;UBERON:0003061!8.29e-15!102;UBERON:0007023!1.04e-12!115;UBERON:0002193!3.72e-12!112;UBERON:0000178!2.38e-08!15;UBERON:0000179!2.38e-08!15;UBERON:0000463!2.38e-08!15;UBERON:0002371!1.27e-07!80;UBERON:0001474!5.14e-07!86;UBERON:0002619!6.01e-07!22;UBERON:0001950!8.44e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.34e-10;15!UBERON:0000179;9.34e-10;15!UBERON:0000463;9.34e-10;15!UBERON:0002619;4.40e-08;22!UBERON:0001950;5.95e-08;20!UBERON:0002390;8.42e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;9.34e-10;15!UBERON:0000179;9.34e-10;15!UBERON:0000463;9.34e-10;15!UBERON:0002619;4.40e-08;22!UBERON:0001950;5.95e-08;20!UBERON:0002390;8.42e-08;32 | ||
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| ||
|short_description=p2@SATB1 | |short_description=p2@SATB1 | ||
}} | }} |
Latest revision as of 03:18, 17 September 2015
Short description: | p2@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SATB1_5end |
Coexpression cluster: | C712_thymus_biphenotypic_CD4_non_granulocyte_merkel_acute |
Association with transcript: | 0bp_to_ENST00000440737, ENST00000493952_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | C9JP21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.03e-17 | 98 |
blood island | 3.03e-17 | 98 |
hemolymphoid system | 4.36e-15 | 108 |
blood | 7.35e-10 | 15 |
haemolymphatic fluid | 7.35e-10 | 15 |
organism substance | 7.35e-10 | 15 |
adult organism | 3.82e-09 | 114 |
immune system | 4.72e-09 | 93 |
bone marrow | 2.17e-08 | 76 |
regional part of cerebral cortex | 3.78e-08 | 22 |
neocortex | 5.71e-08 | 20 |
bone element | 1.16e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.49e-12 | 51 |
immune system cancer | 1.49e-12 | 51 |
leukemia | 5.65e-12 | 39 |
myeloid leukemia | 7.10e-11 | 31 |