FFCP PHASE1:Hg19::chr11:46405305..46405343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46405305..46405343,- | |||
|coexpression_cluster_id=C2134 | |coexpression_cluster_id=C2134 | ||
|description=CAGE_peak_at_chr11:46405305..46405343,- | |description=CAGE_peak_at_chr11:46405305..46405343,- | ||
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|ontology_enrichment_celltype=CL:0000066!4.42e-19!254;CL:0002321!1.30e-15!248;CL:0000220!4.53e-15!246;CL:0000222!1.76e-08!119;CL:0000548!4.15e-07!679;CL:0000004!4.15e-07!679;CL:0000255!4.15e-07!679 | |ontology_enrichment_celltype=CL:0000066!4.42e-19!254;CL:0002321!1.30e-15!248;CL:0000220!4.53e-15!246;CL:0000222!1.76e-08!119;CL:0000548!4.15e-07!679;CL:0000004!4.15e-07!679;CL:0000255!4.15e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000128;3.30e-08;7!CL:0000126;3.30e-08;7!CL:0000127;3.30e-08;7!CL:0002319;4.27e-08;25 | |ontology_enrichment_celltype_v019=CL:0000128;3.30e-08;7!CL:0000126;3.30e-08;7!CL:0000127;3.30e-08;7!CL:0002319;4.27e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.06e-13,253;CL:0002321,7.35e-12,250;CL:0000128,3.81e-08,7;CL:0000126,3.81e-08,7;CL:0000127,3.81e-08,7;CL:0002453,3.81e-08,7;CL:0002319,5.48e-08,25;CL:0000133,2.04e-07,59;CL:0000393,2.85e-07,61;CL:0000211,2.85e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.07e-14!143;DOID:305!1.36e-09!106;DOID:14566!1.65e-07!239;DOID:162!5.33e-07!235 | |ontology_enrichment_disease=DOID:0050687!1.07e-14!143;DOID:305!1.36e-09!106;DOID:14566!1.65e-07!239;DOID:162!5.33e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.49e-13,143;DOID:305,1.30e-09,106;DOID:3095,9.67e-07,22;DOID:2994,9.67e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000490!5.96e-10!138;UBERON:0005256!1.01e-08!143;UBERON:0000119!2.27e-08!312;UBERON:0000483!3.21e-08!309;UBERON:0000481!5.02e-07!347;UBERON:0002100!6.99e-07!216;UBERON:0006554!8.04e-07!44;UBERON:0005156!8.67e-07!59;UBERON:0000990!8.67e-07!59 | |ontology_enrichment_uberon=UBERON:0000490!5.96e-10!138;UBERON:0005256!1.01e-08!143;UBERON:0000119!2.27e-08!312;UBERON:0000483!3.21e-08!309;UBERON:0000481!5.02e-07!347;UBERON:0002100!6.99e-07!216;UBERON:0006554!8.04e-07!44;UBERON:0005156!8.67e-07!59;UBERON:0000990!8.67e-07!59 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.80e-10,160;UBERON:0009142,4.80e-10,160 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.737201809504527,0.697801167972428,2.62129646556207,1.31883489114227,2.22779435328084,0.331397375727916,0,0,0.730310090387373,1.95173119516203,1.47745269692145,2.44800829493104,4.70182082217132,9.15955158819382,5.06435372769671,4.6450776650077,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.587200878669695,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.40648818027883,0,0.50133791063589,0.724232594804119,0,0.973269740605272,7.18464610446916,3.99112915432615,4.83091321312193,0.327447688744282,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0,0.825354125820202,0.208994966536811,1.8089173141853,0.71153252537342,0,0,0,7.32186172644509,1.10298924103761,3.24056779152704,0.803697554556718,1.79623498100936,1.57656072676651,0,0,0.732806975721629,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0.286836620748814,1.06400514659507,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0.468642863667593,0,0.570471821544449,0.448346041655403,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,1.35117749042945,0,1.18800285728205,2.96720315134268,0,0,0.841680569770331,0.500474079487857,0,0,0,2.40380894250555,1.02088964844019,0,0.85422955527427,0.423863802319124,0,0.206105058476878,0,0.744467425326359,0.168776332241266,0.194874010322397,0,1.19664868234989,0,0,0.403008392910561,1.01736355386293,0.386521706326594,0.272746120590835,0,1.70763188581434,1.19276791489337,1.74290914304278,2.07322110030741,3.78481276313443,3.28479623168247,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,5.7620361586396,4.41026134156626,0,0,0,0,0.860919069801795,1.88724591328378,0,0,0.100528972411631,0.185176890317059,2.6064664424826,0,2.88662684050547,5.33279862885353,0.939269553886573,5.4859250149208,3.24089858803628,1.52203321787679,2.37061319387782,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0.43596006883328,0.36669142910475,1.03417372606222,3.57656445851882,0.845302752556,1.59562869950922,0,2.57207374262142,4.25547396069835,0.799266537048298,1.57275793023962,5.96883765930587,3.29296134712308,0,0.710783897485092,0.791951872933429,1.20575750823834,1.74306691720059,0.199945982364114,0,0,0,0.239624855491583,0,2.85273810081437,0,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0.773288812777695,2.17771144934653,7.01732626818479,0,0,0,2.4538298343828,2.50085260529839,0.813795071099207,0.415941723061614,0.713715955188647,0.788512075169673,0,0.300946099727719,0,2.0694614258501,0,0.368738337083406,1.12948698808508,0.783204629850962,1.02943027143257,0,0,0,1.5156378572313,3.32870879020994,8.76931850656073,0,0.153461973288062,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.464841513839837,5.92211302998949,0.601519410909855,0.644566922551274,1.03333003348146,0.910455840033585,3.14698595902618,1.35359883872224,1.00119938235739,7.0591479225917,1.46139224653261,1.16106791782163,1.13733384070897,0.510281115829547,0.431831832204279,1.54227252690289,3.25135725052623,9.03041592938736,0.509752546090077,0,2.91037181138832,0,0,8.71930425395723,2.95213181129735,0.976135183992909,0.103041011647722,0.732555718546747,0.495056999523528,0,0,3.21367859688319,3.57681657680851,0.462145851343933,0.307007349452259,0,1.71872391789238,2.46528379654188,1.27839941124151,2.58192903375538,0.330569830721956,0.768760269460425,0.255225424989168,0.6069466851333,0,0.31481234683064,0,3.69640296211307,1.59691809095107,0,0.37064843820784,0,1.116475108079,0.316379424718726,0.762520775695299,1.79128453917934,0.855877976067841,0.318203247925937,0,2.51821440616641,2.74537029736055,1.53156123049392,0,0,0.421258456238981,2.43816869544795,4.87426979262569,0,0.409499734223957,2.2624869112594,0,0,1.32687795048244,0.876901770507525,1.15755106853338,1.9676842561399,0,0.6196469961995,0,2.29458163526482,2.75097314836739,0,1.41904425628239,1.68886108238131,0.329294892959902,0.75894634753143,2.79947776195986,0.0962221127255121,0,0,0,0,0,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,2.56377770705936,0,2.20536194382929,1.30062222588003,1.73123055571734,0.426851060090485,0,0.199579371432817,0,0,0.649243880549111,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24568648489864,0.293016358543788,0,0,0,0,1.78178808499583,0,0,0.140669416410513,1.8922479853894,0,0.211125408127993,0,0,1.0077309914171,3.1703291575668,0,0,0.0898683511473268,1.43216939740487,0,0,0,0,0,0.0927680981618513,0,0,0,0,11.606931725121,1.77977555204936,0.709163045303809,0.344743373241465,0,2.95162491386597,0,0,0,0,0.295547618953547,0.219385397153973,0,0.83654246567162,0.384751292518985,0,1.38338342632836,0,2.7161842980502,0,0.274792780205587,0,0,0.31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| ||
|short_description=p@chr11:46405305..46405343,- | |short_description=p@chr11:46405305..46405343,- | ||
}} | }} |
Latest revision as of 22:28, 23 July 2015
Short description: | p@chr11:46405305..46405343, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46405305..46405343, - |
Coexpression cluster: | C2134_normal_liposarcoma_bronchial_small_Placental_endometrial_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.06e-13 | 253 |
embryonic cell | 7.35e-12 | 250 |
oligodendrocyte | 3.81e-08 | 7 |
macroglial cell | 3.81e-08 | 7 |
astrocyte | 3.81e-08 | 7 |
oligodendrocyte precursor cell | 3.81e-08 | 7 |
neural cell | 5.48e-08 | 25 |
neurectodermal cell | 2.04e-07 | 59 |
electrically responsive cell | 2.85e-07 | 61 |
electrically active cell | 2.85e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 4.80e-10 | 160 |
entire embryonic mesenchyme | 4.80e-10 | 160 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.49e-13 | 143 |
carcinoma | 1.30e-09 | 106 |
germ cell and embryonal cancer | 9.67e-07 | 22 |
germ cell cancer | 9.67e-07 | 22 |