FFCP PHASE1:Hg19::chr1:235491875..235491895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9453 | |EntrezGene=9453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4249 | |HGNC=4249 | ||
|TSSclassifier=strong | |||
|UniProt=O95749,A8MVQ8 | |UniProt=O95749,A8MVQ8 | ||
|association_with_transcript=0bp_to_ENST00000282841,ENST00000391855,ENST00000482013_5end | |association_with_transcript=0bp_to_ENST00000282841,ENST00000391855,ENST00000482013_5end | ||
|cluster_id=chr1:235491875..235491895,+ | |||
|description=CAGE_peak_1_at_GGPS1_5end | |description=CAGE_peak_1_at_GGPS1_5end | ||
|id=chr1:235491875..235491895,+ | |id=chr1:235491875..235491895,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.78e-12!115;UBERON:0002780!2.96e-08!41;UBERON:0001890!2.96e-08!41;UBERON:0006240!2.96e-08!41;UBERON:0000073!2.98e-08!94;UBERON:0001016!2.98e-08!94;UBERON:0003080!3.72e-08!42;UBERON:0001049!3.92e-08!57;UBERON:0005068!3.92e-08!57;UBERON:0006241!3.92e-08!57;UBERON:0007135!3.92e-08!57;UBERON:0005743!8.12e-08!86;UBERON:0001017!1.10e-07!82;UBERON:0000033!1.21e-07!123;UBERON:0000153!1.67e-07!129;UBERON:0007811!1.67e-07!129;UBERON:0000955!2.66e-07!69;UBERON:0006238!2.66e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!5.78e-12!115;UBERON:0002780!2.96e-08!41;UBERON:0001890!2.96e-08!41;UBERON:0006240!2.96e-08!41;UBERON:0000073!2.98e-08!94;UBERON:0001016!2.98e-08!94;UBERON:0003080!3.72e-08!42;UBERON:0001049!3.92e-08!57;UBERON:0005068!3.92e-08!57;UBERON:0006241!3.92e-08!57;UBERON:0007135!3.92e-08!57;UBERON:0005743!8.12e-08!86;UBERON:0001017!1.10e-07!82;UBERON:0000033!1.21e-07!123;UBERON:0000153!1.67e-07!129;UBERON:0007811!1.67e-07!129;UBERON:0000955!2.66e-07!69;UBERON:0006238!2.66e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.10e-11,114;UBERON:0002780,2.96e-08,41;UBERON:0001890,2.96e-08,41;UBERON:0003080,2.96e-08,41;UBERON:0006240,2.96e-08,41;UBERON:0001049,3.38e-08,56;UBERON:0005068,3.38e-08,56;UBERON:0006241,3.38e-08,56;UBERON:0007135,3.38e-08,56;UBERON:0001016,3.86e-08,89;UBERON:0001017,1.03e-07,81;UBERON:0000073,1.73e-07,53;UBERON:0002616,1.73e-07,53;UBERON:0000955,2.44e-07,68;UBERON:0006238,2.44e-07,68;UBERON:0004121,8.84e-07,171;UBERON:0000924,8.84e-07,171;UBERON:0006601,8.84e-07,171;UBERON:0011216,9.67e-07,223 | |||
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| ||
|short_description=p1@GGPS1 | |short_description=p1@GGPS1 | ||
}} | }} |
Latest revision as of 12:31, 16 September 2015
Short description: | p1@GGPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GGPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000282841, ENST00000391855, ENST00000482013_5end |
EntrezGene: | GGPS1 |
HGNC: | 4249 |
UniProt: | O95749A8MVQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.10e-11 | 114 |
regional part of forebrain | 2.96e-08 | 41 |
forebrain | 2.96e-08 | 41 |
anterior neural tube | 2.96e-08 | 41 |
future forebrain | 2.96e-08 | 41 |
neural tube | 3.38e-08 | 56 |
neural rod | 3.38e-08 | 56 |
future spinal cord | 3.38e-08 | 56 |
neural keel | 3.38e-08 | 56 |
nervous system | 3.86e-08 | 89 |
central nervous system | 1.03e-07 | 81 |
regional part of nervous system | 1.73e-07 | 53 |
regional part of brain | 1.73e-07 | 53 |
brain | 2.44e-07 | 68 |
future brain | 2.44e-07 | 68 |
ectoderm-derived structure | 8.84e-07 | 171 |
ectoderm | 8.84e-07 | 171 |
presumptive ectoderm | 8.84e-07 | 171 |
organ system subdivision | 9.67e-07 | 223 |