FFCP PHASE1:Hg19::chr8:23399305..23399311,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51312 | |EntrezGene=51312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29786 | |HGNC=29786 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_ENST00000520949_5end | |association_with_transcript=105bp_to_ENST00000520949_5end | ||
|cluster_id=chr8:23399305..23399311,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_34_at_SLC25A37_5end | |description=CAGE_peak_34_at_SLC25A37_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.59e-62!42;CL:0000860!8.62e-58!45;CL:0000766!6.07e-46!76;CL:0002194!5.36e-41!63;CL:0000576!5.36e-41!63;CL:0000040!5.36e-41!63;CL:0000559!5.36e-41!63;CL:0002009!1.71e-39!65;CL:0000839!4.17e-36!70;CL:0000557!1.74e-35!71;CL:0000763!3.36e-28!112;CL:0000049!3.36e-28!112;CL:0000738!1.21e-23!140;CL:0002087!7.31e-21!119;CL:0000037!1.90e-17!172;CL:0000566!1.90e-17!172;CL:0002031!6.81e-17!124;CL:0002032!3.54e-16!165;CL:0000837!3.54e-16!165;CL:0000988!5.79e-16!182;CL:0000094!3.29e-10!8;CL:0000771!6.46e-08!2;CL:0000081!2.61e-07!11 | |ontology_enrichment_celltype=CL:0002057!1.59e-62!42;CL:0000860!8.62e-58!45;CL:0000766!6.07e-46!76;CL:0002194!5.36e-41!63;CL:0000576!5.36e-41!63;CL:0000040!5.36e-41!63;CL:0000559!5.36e-41!63;CL:0002009!1.71e-39!65;CL:0000839!4.17e-36!70;CL:0000557!1.74e-35!71;CL:0000763!3.36e-28!112;CL:0000049!3.36e-28!112;CL:0000738!1.21e-23!140;CL:0002087!7.31e-21!119;CL:0000037!1.90e-17!172;CL:0000566!1.90e-17!172;CL:0002031!6.81e-17!124;CL:0002032!3.54e-16!165;CL:0000837!3.54e-16!165;CL:0000988!5.79e-16!182;CL:0000094!3.29e-10!8;CL:0000771!6.46e-08!2;CL:0000081!2.61e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-56;33!CL:0002057;1.26e-56;33!CL:0000473;3.64e-39;39!CL:0000234;3.64e-39;39!CL:0000576;4.76e-29;48!CL:0000771;3.17e-20;2!CL:0000094;3.18e-19;8!CL:0000766;3.57e-16;69!CL:0000081;4.70e-14;11!CL:0000767;1.81e-13;3!CL:0000763;1.67e-11;100!CL:0002087;6.53e-10;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.26e-56;33!CL:0002057;1.26e-56;33!CL:0000473;3.64e-39;39!CL:0000234;3.64e-39;39!CL:0000576;4.76e-29;48!CL:0000771;3.17e-20;2!CL:0000094;3.18e-19;8!CL:0000766;3.57e-16;69!CL:0000081;4.70e-14;11!CL:0000767;1.81e-13;3!CL:0000763;1.67e-11;100!CL:0002087;6.53e-10;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.54e-55,42;CL:0002057,1.54e-55,42;CL:0000766,3.25e-49,72;CL:0000473,2.61e-48,48;CL:0000234,2.61e-48,48;CL:0002194,3.53e-38,59;CL:0000576,3.53e-38,59;CL:0000040,3.53e-38,59;CL:0000559,3.53e-38,59;CL:0002009,7.17e-37,61;CL:0000839,6.10e-34,66;CL:0000557,2.09e-33,67;CL:0000763,4.38e-32,108;CL:0000049,4.38e-32,108;CL:0000738,5.72e-25,136;CL:0002032,1.10e-20,161;CL:0000837,1.10e-20,161;CL:0000771,3.67e-20,2;CL:0000037,1.04e-19,168;CL:0000094,5.22e-19,8;CL:0000988,1.43e-18,177;CL:0002087,1.45e-18,115;CL:0002031,1.08e-17,120;CL:0000081,6.72e-14,11;CL:0000767,3.20e-13,3;CL:0000134,8.11e-08,354;CL:0002320,1.32e-07,361;CL:0000219,7.39e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.02e-36;42!CL:0000049;2.63e-08;108 | |ontology_enrichment_development_v019=CL:0002057;2.02e-36;42!CL:0000049;2.63e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-35!102;UBERON:0003061!1.20e-35!102;UBERON:0002193!1.34e-31!112;UBERON:0002371!1.36e-30!80;UBERON:0001474!6.75e-28!86;UBERON:0002405!2.82e-23!115;UBERON:0004765!1.47e-22!101;UBERON:0001434!1.47e-22!101;UBERON:0003081!1.29e-15!216;UBERON:0002204!1.49e-10!167;UBERON:0000178!5.53e-07!15;UBERON:0000179!5.53e-07!15;UBERON:0000463!5.53e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.20e-35!102;UBERON:0003061!1.20e-35!102;UBERON:0002193!1.34e-31!112;UBERON:0002371!1.36e-30!80;UBERON:0001474!6.75e-28!86;UBERON:0002405!2.82e-23!115;UBERON:0004765!1.47e-22!101;UBERON:0001434!1.47e-22!101;UBERON:0003081!1.29e-15!216;UBERON:0002204!1.49e-10!167;UBERON:0000178!5.53e-07!15;UBERON:0000179!5.53e-07!15;UBERON:0000463!5.53e-07!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.21e-29,76;UBERON:0001474,6.23e-27,82;UBERON:0004765,2.38e-24,90;UBERON:0002405,1.71e-23,93;UBERON:0002390,3.50e-22,98;UBERON:0003061,3.50e-22,98;UBERON:0001434,1.08e-21,100;UBERON:0002193,6.43e-20,108;UBERON:0002204,5.02e-12,167;UBERON:0003081,7.31e-11,203;UBERON:0002384,2.57e-07,371 | |||
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| ||
|short_description=p34@SLC25A37 | |short_description=p34@SLC25A37 | ||
}} | }} |
Latest revision as of 14:24, 17 September 2015
Short description: | p34@SLC25A37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_SLC25A37_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 105bp_to_ENST00000520949_5end |
EntrezGene: | SLC25A37 |
HGNC: | 29786 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.54e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-55 | 42 |
myeloid leukocyte | 3.25e-49 | 72 |
defensive cell | 2.61e-48 | 48 |
phagocyte | 2.61e-48 | 48 |
monopoietic cell | 3.53e-38 | 59 |
monocyte | 3.53e-38 | 59 |
monoblast | 3.53e-38 | 59 |
promonocyte | 3.53e-38 | 59 |
macrophage dendritic cell progenitor | 7.17e-37 | 61 |
myeloid lineage restricted progenitor cell | 6.10e-34 | 66 |
granulocyte monocyte progenitor cell | 2.09e-33 | 67 |
myeloid cell | 4.38e-32 | 108 |
common myeloid progenitor | 4.38e-32 | 108 |
leukocyte | 5.72e-25 | 136 |
hematopoietic oligopotent progenitor cell | 1.10e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-20 | 161 |
eosinophil | 3.67e-20 | 2 |
hematopoietic stem cell | 1.04e-19 | 168 |
granulocyte | 5.22e-19 | 8 |
hematopoietic cell | 1.43e-18 | 177 |
nongranular leukocyte | 1.45e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.08e-17 | 120 |
blood cell | 6.72e-14 | 11 |
basophil | 3.20e-13 | 3 |
mesenchymal cell | 8.11e-08 | 354 |
connective tissue cell | 1.32e-07 | 361 |
motile cell | 7.39e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.21e-29 | 76 |
bone element | 6.23e-27 | 82 |
skeletal element | 2.38e-24 | 90 |
immune system | 1.71e-23 | 93 |
hematopoietic system | 3.50e-22 | 98 |
blood island | 3.50e-22 | 98 |
skeletal system | 1.08e-21 | 100 |
hemolymphoid system | 6.43e-20 | 108 |
musculoskeletal system | 5.02e-12 | 167 |
lateral plate mesoderm | 7.31e-11 | 203 |
connective tissue | 2.57e-07 | 371 |