FFCP PHASE1:Hg19::chr15:39878313..39878333,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=477bp_to_ENST00000478845_5end | |association_with_transcript=477bp_to_ENST00000478845_5end | ||
|cluster_id=chr15:39878313..39878333,+ | |||
|coexpression_cluster_id=C1206 | |coexpression_cluster_id=C1206 | ||
|description=CAGE_peak_34_at_THBS1_5end | |description=CAGE_peak_34_at_THBS1_5end | ||
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|ontology_enrichment_celltype=CL:0000057!1.76e-12!75;CL:0002620!3.16e-09!23;CL:0002334!3.22e-07!12;CL:0002139!8.01e-07!24 | |ontology_enrichment_celltype=CL:0000057!1.76e-12!75;CL:0002620!3.16e-09!23;CL:0002334!3.22e-07!12;CL:0002139!8.01e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.91e-17;23!CL:0002580;8.30e-09;3!CL:0002579;2.92e-08;3!CL:0000197;3.41e-08;6!CL:0000098;3.41e-08;6!CL:0002167;3.41e-08;6!CL:0002334;2.54e-07;12 | |ontology_enrichment_celltype_v019=CL:0002620;1.91e-17;23!CL:0002580;8.30e-09;3!CL:0002579;2.92e-08;3!CL:0000197;3.41e-08;6!CL:0000098;3.41e-08;6!CL:0002167;3.41e-08;6!CL:0002334;2.54e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.87e-17,23;CL:0000057,4.63e-17,76;CL:0002580,6.92e-09,3;CL:0002579,3.25e-08,3;CL:0000197,3.49e-08,6;CL:0000098,3.49e-08,6;CL:0002167,3.49e-08,6;CL:0000134,1.65e-07,354;CL:0002334,2.46e-07,12;CL:0002320,3.88e-07,361;CL:0000048,5.65e-07,427 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.58e-14;5!DOID:450;4.58e-14;5!DOID:66;4.58e-14;5!DOID:423;4.58e-14;5!DOID:0080000;4.58e-14;5!DOID:11722;4.58e-14;5 | |ontology_enrichment_disease_v019=DOID:17;4.58e-14;5!DOID:450;4.58e-14;5!DOID:66;4.58e-14;5!DOID:423;4.58e-14;5!DOID:0080000;4.58e-14;5!DOID:11722;4.58e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.00e-14,5;DOID:450,3.00e-14,5;DOID:66,3.00e-14,5;DOID:423,3.00e-14,5;DOID:0080000,3.00e-14,5;DOID:11722,3.00e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!8.50e-08!57;UBERON:0002097!1.23e-07!40;UBERON:0000468!1.28e-07!659;UBERON:0002199!2.09e-07!45;UBERON:0002416!2.09e-07!45;UBERON:0003102!6.82e-07!95 | |ontology_enrichment_uberon=UBERON:0004923!8.50e-08!57;UBERON:0002097!1.23e-07!40;UBERON:0000468!1.28e-07!659;UBERON:0002199!2.09e-07!45;UBERON:0002416!2.09e-07!45;UBERON:0003102!6.82e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.20e-10;41!UBERON:0002199;8.41e-09;46!UBERON:0002416;8.41e-09;46!UBERON:0003688;3.43e-07;6!UBERON:0002358;3.43e-07;6!UBERON:0003684;3.43e-07;6!UBERON:0001178;3.43e-07;6!UBERON:0003102;8.77e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0002097;1.20e-10;41!UBERON:0002199;8.41e-09;46!UBERON:0002416;8.41e-09;46!UBERON:0003688;3.43e-07;6!UBERON:0002358;3.43e-07;6!UBERON:0003684;3.43e-07;6!UBERON:0001178;3.43e-07;6!UBERON:0003102;8.77e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.20e-15,41;UBERON:0002199,6.75e-13,46;UBERON:0002416,6.75e-13,46;UBERON:0002384,9.87e-08,371;UBERON:0003688,3.84e-07,6;UBERON:0002358,3.84e-07,6;UBERON:0003684,3.84e-07,6;UBERON:0001178,3.84e-07,6 | |||
|phase1_expression=1.63510541343501,4.92431204949261,0.845726424575827,3.00219895059391,0.893922188854576,0.872338524100369,0,0,0,0,0,0.436882744260345,0,0,0,1.34465029290355,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,6.41742231904453,0.217010870715852,0,0,0,1.16318591023652,0,0,4.88100977501938,0.411167888021826,0.619412741790207,3.74000110018796,0.512321413058201,0.236482229888585,1.37898272294647,0,0,2.25890807451126,0.272906150057846,0.449446968890169,1.53041946185451,0.641858054152187,0,0.989553900560148,0.199463657621632,0,8.41606792022894,0.56738522469114,0.622822248995575,1.50749199154046,0,0,6.65939452896706,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.89151321907653,0,0.869079113764942,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,1.13061588384802,0.419499436209906,0.825354125820202,0,1.29208379584664,1.06729878806013,0.33472061276467,0.402829317109147,0,1.46437234528902,0.367663080345869,0.81014194788176,1.25019619597712,0.44905874525234,0.450445921933289,0,0,0.183201743930407,0,0,0,2.98183171017191,0.633152558322899,2.64818361626438,1.14734648299525,0.354668382198357,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,1.7308685049499,0,0,0.505008341862199,0,0.277064115484183,0.438977620880838,2.45190236639216,0.45071417671979,0.113432183160021,17.7595739331973,4.91181994282705,2.7551147150743,3.30100205692843,1.64884046781502,15.7160729427834,2.23340227597908,4.05063197379039,0.974370051611986,13.126556260694,1.84099797284599,1.2931684545505,6.03516307278244,0.201504196455281,1.01736355386293,0,0.272746120590835,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,3.71494342425583,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0.502644862058154,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,1.28680194292333,0,0,0,0.355391948742546,0,0,0,0,0,0,0,1.4377491329495,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,8.11086359970148,7.49401752948079,7.56971592162886,3.5142424497814,0,0,0,1.32845119707087,0.184369168541703,0.521301686808497,0,0,0.413536052245775,0.647142602455851,0.213455115606889,0.303127571446259,0,0.30239029332968,2.72918588600655,5.98501695823444,1.40330047216537,1.15325234330131,2.04682899626681,1.76939313257968,0,0.925258162815933,0.887808626565635,0.410635780069046,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,0.184161977871793,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,1.95018073810956,0,0,0.154048617114644,0,0,0.214840489736547,0.435050081742686,0,0,0,0.384380134730212,9.31572801210464,0,0,4.09256050879832,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,1.31178950409327,0,0.92947049429925,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0.556543525114529,0,0,0.597743964753209,0.828851746593443,0,0.306806047506464,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0.586654148204409,0,0.213452994739353,0,0,0,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.599037001496973,0.429226048136571,0,0.268733889946905,3.96329871896644,0,0.315132729228895,0.247247575143499,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.575745591958336,0,0,0,0,0,0,0,0,2.55582032678133,0,0,0,0,0,0,0,0.213574825135389,1.25763444079733,1.24271716604159,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0.597019211547496,0.701139929541673,2.77402930751307,0.189403005275089,1.5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| ||
|short_description=p34@THBS1 | |short_description=p34@THBS1 | ||
}} | }} |
Latest revision as of 10:39, 17 September 2015
Short description: | p34@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_THBS1_5end |
Coexpression cluster: | C1206_Fibroblast_CD14_Small_Olfactory_Preadipocyte_Adipocyte_hepatic |
Association with transcript: | 477bp_to_ENST00000478845_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.87e-17 | 23 |
fibroblast | 4.63e-17 | 76 |
preadipocyte of the breast | 6.92e-09 | 3 |
omentum preadipocyte | 3.25e-08 | 3 |
receptor cell | 3.49e-08 | 6 |
sensory epithelial cell | 3.49e-08 | 6 |
olfactory epithelial cell | 3.49e-08 | 6 |
mesenchymal cell | 1.65e-07 | 354 |
preadipocyte | 2.46e-07 | 12 |
connective tissue cell | 3.88e-07 | 361 |
multi fate stem cell | 5.65e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.20e-15 | 41 |
integument | 6.75e-13 | 46 |
integumental system | 6.75e-13 | 46 |
connective tissue | 9.87e-08 | 371 |
omentum | 3.84e-07 | 6 |
peritoneum | 3.84e-07 | 6 |
abdominal cavity | 3.84e-07 | 6 |
visceral peritoneum | 3.84e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.00e-14 | 5 |
myotonic disease | 3.00e-14 | 5 |
muscle tissue disease | 3.00e-14 | 5 |
myopathy | 3.00e-14 | 5 |
muscular disease | 3.00e-14 | 5 |
myotonic dystrophy | 3.00e-14 | 5 |