FFCP PHASE1:Hg19::chr7:84816338..84816354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=223117 | |EntrezGene=223117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10726 | |HGNC=10726 | ||
|TSSclassifier=strong | |||
|UniProt=C9JYT6 | |UniProt=C9JYT6 | ||
|association_with_transcript=-167bp_to_ENST00000444867,uc010lee.1_5end | |association_with_transcript=-167bp_to_ENST00000444867,uc010lee.1_5end | ||
|cluster_id=chr7:84816338..84816354,- | |||
|coexpression_cluster_id=C153 | |coexpression_cluster_id=C153 | ||
|description=CAGE_peak_5_at_SEMA3D_5end | |description=CAGE_peak_5_at_SEMA3D_5end | ||
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|ontology_enrichment_celltype=CL:1000306!2.90e-07!4;CL:0002547!2.90e-07!4 | |ontology_enrichment_celltype=CL:1000306!2.90e-07!4;CL:0002547!2.90e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000306;8.28e-21;4!CL:0002547;8.28e-21;4!CL:0002592;3.45e-07;3 | |ontology_enrichment_celltype_v019=CL:1000306;8.28e-21;4!CL:0002547;8.28e-21;4!CL:0002592;3.45e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.30e-20,4;CL:0002547,1.30e-20,4;CL:0002592,2.85e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.26e-07;7 | |ontology_enrichment_development_v019=UBERON:0004872;3.26e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.37e-12!84;UBERON:0002049!1.41e-11!79;UBERON:0007798!1.41e-11!79;UBERON:0000055!1.24e-10!69;UBERON:0001009!2.91e-10!113;UBERON:0004535!3.91e-10!110;UBERON:0007023!8.74e-10!115;UBERON:0000477!1.38e-09!286;UBERON:0001981!2.56e-09!60;UBERON:0007500!2.56e-09!60;UBERON:0004537!2.56e-09!60;UBERON:0006965!2.56e-09!60;UBERON:0000415!2.90e-07!4;UBERON:0007240!2.90e-07!4;UBERON:0005742!2.90e-07!4;UBERON:0005734!2.90e-07!4;UBERON:0004664!2.90e-07!4;UBERON:0004663!2.90e-07!4;UBERON:0001637!2.93e-07!42;UBERON:0003509!2.93e-07!42;UBERON:0004572!2.93e-07!42;UBERON:0004111!7.40e-07!241;UBERON:0000468!9.13e-07!659 | |ontology_enrichment_uberon=UBERON:0004872!6.37e-12!84;UBERON:0002049!1.41e-11!79;UBERON:0007798!1.41e-11!79;UBERON:0000055!1.24e-10!69;UBERON:0001009!2.91e-10!113;UBERON:0004535!3.91e-10!110;UBERON:0007023!8.74e-10!115;UBERON:0000477!1.38e-09!286;UBERON:0001981!2.56e-09!60;UBERON:0007500!2.56e-09!60;UBERON:0004537!2.56e-09!60;UBERON:0006965!2.56e-09!60;UBERON:0000415!2.90e-07!4;UBERON:0007240!2.90e-07!4;UBERON:0005742!2.90e-07!4;UBERON:0005734!2.90e-07!4;UBERON:0004664!2.90e-07!4;UBERON:0004663!2.90e-07!4;UBERON:0001637!2.93e-07!42;UBERON:0003509!2.93e-07!42;UBERON:0004572!2.93e-07!42;UBERON:0004111!7.40e-07!241;UBERON:0000468!9.13e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.28e-21;4!UBERON:0000415;8.28e-21;4!UBERON:0007240;8.28e-21;4!UBERON:0005742;8.28e-21;4!UBERON:0005734;8.28e-21;4!UBERON:0004664;8.28e-21;4!UBERON:0004663;8.28e-21;4!UBERON:0004573;5.49e-11;33!UBERON:0004571;5.49e-11;33!UBERON:0001637;2.27e-10;42!UBERON:0003509;2.27e-10;42!UBERON:0004572;2.27e-10;42!UBERON:0000055;3.22e-08;65!UBERON:0002106;4.83e-08;3!UBERON:0003498;3.45e-07;3!UBERON:0005985;3.45e-07;3!UBERON:0001621;3.45e-07;3!UBERON:0002049;6.16e-07;75!UBERON:0007798;6.16e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0004797;8.28e-21;4!UBERON:0000415;8.28e-21;4!UBERON:0007240;8.28e-21;4!UBERON:0005742;8.28e-21;4!UBERON:0005734;8.28e-21;4!UBERON:0004664;8.28e-21;4!UBERON:0004663;8.28e-21;4!UBERON:0004573;5.49e-11;33!UBERON:0004571;5.49e-11;33!UBERON:0001637;2.27e-10;42!UBERON:0003509;2.27e-10;42!UBERON:0004572;2.27e-10;42!UBERON:0000055;3.22e-08;65!UBERON:0002106;4.83e-08;3!UBERON:0003498;3.45e-07;3!UBERON:0005985;3.45e-07;3!UBERON:0001621;3.45e-07;3!UBERON:0002049;6.16e-07;75!UBERON:0007798;6.16e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.30e-20,4;UBERON:0007240,1.30e-20,4;UBERON:0005742,1.30e-20,4;UBERON:0005734,1.30e-20,4;UBERON:0004664,1.30e-20,4;UBERON:0004663,1.30e-20,4;UBERON:0004872,2.31e-13,83;UBERON:0004573,3.73e-13,33;UBERON:0004571,3.73e-13,33;UBERON:0000055,5.31e-13,68;UBERON:0002049,1.53e-12,78;UBERON:0007798,1.53e-12,78;UBERON:0001637,5.30e-12,42;UBERON:0003509,5.30e-12,42;UBERON:0004572,5.30e-12,42;UBERON:0004797,7.81e-12,7;UBERON:0007500,2.51e-11,59;UBERON:0001981,2.51e-11,59;UBERON:0004537,2.51e-11,59;UBERON:0006965,2.51e-11,59;UBERON:0004535,1.68e-10,109;UBERON:0001009,4.08e-10,112;UBERON:0002106,4.92e-08,3;UBERON:0004854,4.92e-08,3;UBERON:0009034,4.92e-08,3;UBERON:0002095,4.92e-08,3;UBERON:0004782,4.92e-08,3;UBERON:0003281,4.92e-08,3;UBERON:0009664,4.92e-08,3;UBERON:0002296,4.92e-08,3;UBERON:0005602,4.92e-08,3;UBERON:0001179,4.92e-08,3;UBERON:0006293,4.92e-08,3;UBERON:0001621,2.85e-07,3 | |||
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|short_description=p5@SEMA3D | |short_description=p5@SEMA3D | ||
}} | }} |
Latest revision as of 20:17, 19 September 2015
Short description: | p5@SEMA3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEMA3D_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | -167bp_to_ENST00000444867, uc010lee.1_5end |
EntrezGene: | SEMA3D |
HGNC: | 10726 |
UniProt: | C9JYT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.30e-20 | 4 |
fibroblast of the aortic adventitia | 1.30e-20 | 4 |
smooth muscle cell of the coronary artery | 2.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.30e-20 | 4 |
tunica adventitia of artery | 1.30e-20 | 4 |
adventitia | 1.30e-20 | 4 |
tunica adventitia of blood vessel | 1.30e-20 | 4 |
aorta tunica adventitia | 1.30e-20 | 4 |
aorta wall | 1.30e-20 | 4 |
splanchnic layer of lateral plate mesoderm | 2.31e-13 | 83 |
systemic artery | 3.73e-13 | 33 |
systemic arterial system | 3.73e-13 | 33 |
vessel | 5.31e-13 | 68 |
vasculature | 1.53e-12 | 78 |
vascular system | 1.53e-12 | 78 |
artery | 5.30e-12 | 42 |
arterial blood vessel | 5.30e-12 | 42 |
arterial system | 5.30e-12 | 42 |
blood vessel layer | 7.81e-12 | 7 |
epithelial tube open at both ends | 2.51e-11 | 59 |
blood vessel | 2.51e-11 | 59 |
blood vasculature | 2.51e-11 | 59 |
vascular cord | 2.51e-11 | 59 |
cardiovascular system | 1.68e-10 | 109 |
circulatory system | 4.08e-10 | 112 |
spleen | 4.92e-08 | 3 |
gastrointestinal system mesentery | 4.92e-08 | 3 |
stomach region | 4.92e-08 | 3 |
mesentery | 4.92e-08 | 3 |
gastrointestinal system serosa | 4.92e-08 | 3 |
mesentery of stomach | 4.92e-08 | 3 |
gut mesentery | 4.92e-08 | 3 |
dorsal mesentery | 4.92e-08 | 3 |
dorsal mesogastrium | 4.92e-08 | 3 |
peritoneal cavity | 4.92e-08 | 3 |
spleen primordium | 4.92e-08 | 3 |
coronary artery | 2.85e-07 | 3 |