FFCP PHASE1:Hg19::chr3:15374659..15374696,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9467 | |EntrezGene=9467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10827 | |HGNC=10827 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQW6 | |UniProt=B3KQW6 | ||
|association_with_transcript=0bp_to_ENST00000426925,uc003bzq.1_5end | |association_with_transcript=0bp_to_ENST00000426925,uc003bzq.1_5end | ||
|cluster_id=chr3:15374659..15374696,- | |||
|coexpression_cluster_id=C337 | |coexpression_cluster_id=C337 | ||
|description=CAGE_peak_10_at_SH3BP5_5end | |description=CAGE_peak_10_at_SH3BP5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!1.88e-21!1;UBERON:0001018!1.88e-21!1;UBERON:0002473!1.88e-21!1;UBERON:0005340!1.88e-21!1;UBERON:0002316!1.88e-21!1;UBERON:0003544!1.88e-21!1;UBERON:0001020!1.88e-21!1;UBERON:0005970!1.88e-21!1;UBERON:0002437!1.88e-21!1;UBERON:0004177!3.15e-12!7;UBERON:0005162!2.02e-11!2;UBERON:0000122!2.02e-11!2;UBERON:0000007!2.23e-11!2;UBERON:0002106!6.34e-08!3;UBERON:0004854!6.34e-08!3;UBERON:0009034!6.34e-08!3;UBERON:0002095!6.34e-08!3;UBERON:0004782!6.34e-08!3;UBERON:0003281!6.34e-08!3;UBERON:0009664!6.34e-08!3;UBERON:0002296!6.34e-08!3;UBERON:0005602!6.34e-08!3;UBERON:0001179!6.34e-08!3;UBERON:0006293!6.34e-08!3;UBERON:0000988!7.26e-08!3 | |ontology_enrichment_uberon=UBERON:0002336!1.88e-21!1;UBERON:0001018!1.88e-21!1;UBERON:0002473!1.88e-21!1;UBERON:0005340!1.88e-21!1;UBERON:0002316!1.88e-21!1;UBERON:0003544!1.88e-21!1;UBERON:0001020!1.88e-21!1;UBERON:0005970!1.88e-21!1;UBERON:0002437!1.88e-21!1;UBERON:0004177!3.15e-12!7;UBERON:0005162!2.02e-11!2;UBERON:0000122!2.02e-11!2;UBERON:0000007!2.23e-11!2;UBERON:0002106!6.34e-08!3;UBERON:0004854!6.34e-08!3;UBERON:0009034!6.34e-08!3;UBERON:0002095!6.34e-08!3;UBERON:0004782!6.34e-08!3;UBERON:0003281!6.34e-08!3;UBERON:0009664!6.34e-08!3;UBERON:0002296!6.34e-08!3;UBERON:0005602!6.34e-08!3;UBERON:0001179!6.34e-08!3;UBERON:0006293!6.34e-08!3;UBERON:0000988!7.26e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;2.55e-98;1!UBERON:0011215;2.55e-98;1!UBERON:0001018;2.55e-98;1!UBERON:0002473;2.55e-98;1!UBERON:0005340;2.55e-98;1!UBERON:0003544;2.55e-98;1!UBERON:0005970;2.55e-98;1!UBERON:0002316;2.55e-98;1!UBERON:0001020;2.55e-98;1!UBERON:0002437;2.55e-98;1!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000992;5.28e-09;13 | |ontology_enrichment_uberon_v019=UBERON:0002336;2.55e-98;1!UBERON:0011215;2.55e-98;1!UBERON:0001018;2.55e-98;1!UBERON:0002473;2.55e-98;1!UBERON:0005340;2.55e-98;1!UBERON:0003544;2.55e-98;1!UBERON:0005970;2.55e-98;1!UBERON:0002316;2.55e-98;1!UBERON:0001020;2.55e-98;1!UBERON:0002437;2.55e-98;1!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000992;5.28e-09;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.55e-98,1;UBERON:0011215,2.55e-98,1;UBERON:0001018,2.55e-98,1;UBERON:0002473,2.55e-98,1;UBERON:0005340,2.55e-98,1;UBERON:0003544,2.55e-98,1;UBERON:0005970,2.55e-98,1;UBERON:0002316,2.55e-98,1;UBERON:0001020,2.55e-98,1;UBERON:0002437,2.55e-98,1;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0000992,5.28e-09,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1588337906688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1588337906688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@SH3BP5 | |short_description=p10@SH3BP5 | ||
}} | }} |
Latest revision as of 03:54, 16 September 2015
Short description: | p10@SH3BP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SH3BP5_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | 0bp_to_ENST00000426925, uc003bzq.1_5end |
EntrezGene: | SH3BP5 |
HGNC: | 10827 |
UniProt: | B3KQW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.55e-98 | 1 |
central nervous system cell part cluster | 2.55e-98 | 1 |
axon tract | 2.55e-98 | 1 |
intercerebral commissure | 2.55e-98 | 1 |
dorsal telencephalic commissure | 2.55e-98 | 1 |
brain white matter | 2.55e-98 | 1 |
brain commissure | 2.55e-98 | 1 |
white matter | 2.55e-98 | 1 |
nervous system commissure | 2.55e-98 | 1 |
cerebral hemisphere white matter | 2.55e-98 | 1 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
female gonad | 5.28e-09 | 13 |