FFCP PHASE1:Hg19::chr4:120060444..120060452,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:120060444..120060452,- | |||
|coexpression_cluster_id=C855 | |coexpression_cluster_id=C855 | ||
|description=CAGE_peak_at_chr4:120060444..120060452,- | |description=CAGE_peak_at_chr4:120060444..120060452,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000569!5.55e-14!4;CL:0000011!5.55e-14!4;CL:0002579!4.79e-09!3;CL:0002580!1.19e-08!3;CL:0002334!4.57e-08!12;CL:0000192!7.38e-08!42;CL:0000514!7.38e-08!42;CL:0002616!1.12e-07!1;CL:0000187!2.27e-07!54;CL:0002598!3.62e-07!1;CL:0000680!6.57e-07!57;CL:0000056!6.57e-07!57;CL:0000355!6.57e-07!57 | |ontology_enrichment_celltype=CL:0000569!5.55e-14!4;CL:0000011!5.55e-14!4;CL:0002579!4.79e-09!3;CL:0002580!1.19e-08!3;CL:0002334!4.57e-08!12;CL:0000192!7.38e-08!42;CL:0000514!7.38e-08!42;CL:0002616!1.12e-07!1;CL:0000187!2.27e-07!54;CL:0002598!3.62e-07!1;CL:0000680!6.57e-07!57;CL:0000056!6.57e-07!57;CL:0000355!6.57e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002616;1.30e-19;1!CL:0000077;3.06e-09;19!CL:0002615;2.25e-07;3!CL:0002579;2.63e-07;3 | |ontology_enrichment_celltype_v019=CL:0002616;1.30e-19;1!CL:0000077;3.06e-09;19!CL:0002615;2.25e-07;3!CL:0002579;2.63e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.30e-19,1;CL:0000077,3.06e-09,19;CL:0002615,2.19e-07,3;CL:0002579,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;2.27e-10;2 | |ontology_enrichment_disease_v019=DOID:1909;2.27e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!8.81e-10!6;UBERON:0002358!8.81e-10!6;UBERON:0003684!8.81e-10!6;UBERON:0001178!8.81e-10!6 | |ontology_enrichment_uberon=UBERON:0003688!8.81e-10!6;UBERON:0002358!8.81e-10!6;UBERON:0003684!8.81e-10!6;UBERON:0001178!8.81e-10!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.95e-13;6!UBERON:0002358;4.95e-13;6!UBERON:0003684;4.95e-13;6!UBERON:0001178;4.95e-13;6!UBERON:0005406;1.72e-10;2!UBERON:0004457;5.31e-09;9!UBERON:0000042;5.31e-09;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;4.95e-13;6!UBERON:0002358;4.95e-13;6!UBERON:0003684;4.95e-13;6!UBERON:0001178;4.95e-13;6!UBERON:0005406;1.72e-10;2!UBERON:0004457;5.31e-09;9!UBERON:0000042;5.31e-09;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.81e-13,6;UBERON:0002358,4.81e-13,6;UBERON:0003684,4.81e-13,6;UBERON:0001178,4.81e-13,6;UBERON:0005406,1.72e-10,2;UBERON:0004457,5.64e-07,12;UBERON:0000042,5.64e-07,12 | |||
|phase1_expression=0.908391896352783,0,6.90676580070259,0,0,8.72338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.53346101855175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7849232465156,6.10073421020206,2.99918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,4.74114852246094,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,1.06461206063404,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0.95460974377781,0,0,0,0.117812402345686,0.606547444719948,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45936823149932,0,0,0,0,0,0,0.554805861502613,0,0,0,0.686520205190771,1.05861646634267,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,2.66563648518157,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.908391896352783,0,6.90676580070259,0,0,8.72338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.53346101855175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7849232465156,6.10073421020206,2.99918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,4.74114852246094,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,1.06461206063404,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0.95460974377781,0,0,0,0.117812402345686,0.606547444719948,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45936823149932,0,0,0,0,0,0,0.554805861502613,0,0,0,0.686520205190771,1.05861646634267,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,2.66563648518157,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:120060444..120060452,- | |short_description=p@chr4:120060444..120060452,- | ||
}} | }} |
Latest revision as of 01:16, 30 July 2015
Short description: | p@chr4:120060444..120060452, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:120060444..120060452, - |
Coexpression cluster: | C855_Mesothelial_Fibroblast_mesenchymal_Smooth_Sertoli_Myoblast_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.30e-19 | 1 |
mesothelial cell | 3.06e-09 | 19 |
adipocyte of omentum tissue | 2.19e-07 | 3 |
omentum preadipocyte | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.81e-13 | 6 |
peritoneum | 4.81e-13 | 6 |
abdominal cavity | 4.81e-13 | 6 |
visceral peritoneum | 4.81e-13 | 6 |
perirenal fat | 1.72e-10 | 2 |
cavity lining | 5.64e-07 | 12 |
serous membrane | 5.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.27e-10 | 2 |