FFCP PHASE1:Hg19::chr1:45769711..45769721,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:45769711..45769721,- | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr1:45769711..45769721,- | |description=CAGE_peak_at_chr1:45769711..45769721,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!2.29e-25!7;CL:0000586!2.29e-25!7 | |ontology_enrichment_celltype=CL:0000039!2.29e-25!7;CL:0000586!2.29e-25!7 | ||
|ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4!CL:0000039;1.65e-15;7!CL:0000586;1.65e-15;7 | |ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4!CL:0000039;1.65e-15;7!CL:0000586;1.65e-15;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.14e-26,4;CL:0002222,7.14e-26,4;CL:0002224,7.14e-26,4;CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | ||
|ontology_enrichment_disease=DOID:3095!1.27e-17!22;DOID:2994!1.27e-17!22;DOID:0050687!1.08e-14!143;DOID:162!1.50e-14!235;DOID:14566!4.71e-14!239;DOID:1749!2.00e-11!14;DOID:305!1.00e-10!106;DOID:0050615!9.15e-08!16;DOID:0050686!3.78e-07!137 | |ontology_enrichment_disease=DOID:3095!1.27e-17!22;DOID:2994!1.27e-17!22;DOID:0050687!1.08e-14!143;DOID:162!1.50e-14!235;DOID:14566!4.71e-14!239;DOID:1749!2.00e-11!14;DOID:305!1.00e-10!106;DOID:0050615!9.15e-08!16;DOID:0050686!3.78e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!6.30e-08!8 | |ontology_enrichment_uberon=UBERON:0000473!6.30e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0000473;9.39e-14;8!UBERON:0003135;2.16e-10;11!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0000473;9.39e-14;8!UBERON:0003135;2.16e-10;11!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.14e-26,4;UBERON:0005389,7.14e-26,4;UBERON:0000484,7.14e-26,4;UBERON:0002546,7.14e-26,4;UBERON:0000965,7.14e-26,4;UBERON:0001803,7.14e-26,4;UBERON:0003073,7.14e-26,4;UBERON:0005426,7.14e-26,4;UBERON:0000473,9.39e-14,8;UBERON:0000076,1.07e-13,8;UBERON:0003135,2.16e-10,11;UBERON:0007625,2.37e-10,11;UBERON:0001801,2.00e-08,14 | |||
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| ||
|short_description=p@chr1:45769711..45769721,- | |short_description=p@chr1:45769711..45769721,- | ||
}} | }} |
Latest revision as of 08:40, 28 July 2015
Short description: | p@chr1:45769711..45769721, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:45769711..45769721, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.14e-26 | 4 |
vertebrate lens cell | 7.14e-26 | 4 |
lens epithelial cell | 7.14e-26 | 4 |
germ line cell | 1.65e-15 | 7 |
germ cell | 1.65e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.14e-26 | 4 |
transparent eye structure | 7.14e-26 | 4 |
simple cuboidal epithelium | 7.14e-26 | 4 |
cranial placode | 7.14e-26 | 4 |
lens of camera-type eye | 7.14e-26 | 4 |
epithelium of lens | 7.14e-26 | 4 |
lens placode | 7.14e-26 | 4 |
lens vesicle | 7.14e-26 | 4 |
testis | 9.39e-14 | 8 |
external ectoderm | 1.07e-13 | 8 |
male reproductive organ | 2.16e-10 | 11 |
pigment epithelium of eye | 2.37e-10 | 11 |
anterior segment of eyeball | 2.00e-08 | 14 |