FFCP PHASE1:Hg19::chr13:48878040..48878051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5925 | |EntrezGene=5925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9884 | |HGNC=9884 | ||
|TSSclassifier=strong | |||
|UniProt=P06400,Q92728 | |UniProt=P06400,Q92728 | ||
|association_with_transcript=129bp_to_ENST00000267163,ENST00000467505_5end | |association_with_transcript=129bp_to_ENST00000267163,ENST00000467505_5end | ||
|cluster_id=chr13:48878040..48878051,+ | |||
|description=CAGE_peak_6_at_RB1_5end | |description=CAGE_peak_6_at_RB1_5end | ||
|id=chr13:48878040..48878051,+ | |id=chr13:48878040..48878051,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.45e-48!172;CL:0000566!1.45e-48!172;CL:0000738!6.22e-48!140;CL:0000988!1.04e-45!182;CL:0002032!1.31e-45!165;CL:0000837!1.31e-45!165;CL:0002031!5.89e-42!124;CL:0002087!6.85e-42!119;CL:0000763!9.95e-29!112;CL:0000049!9.95e-29!112;CL:0000766!2.98e-28!76;CL:0000557!6.50e-27!71;CL:0000839!7.79e-27!70;CL:0000860!1.98e-26!45;CL:0002057!2.47e-26!42;CL:0002194!6.22e-25!63;CL:0000576!6.22e-25!63;CL:0000040!6.22e-25!63;CL:0000559!6.22e-25!63;CL:0002009!1.72e-24!65;CL:0000134!4.54e-16!358;CL:0000542!7.27e-15!53;CL:0000051!7.27e-15!53;CL:0000838!9.11e-15!52;CL:0002320!1.51e-14!365;CL:0000219!8.27e-14!390;CL:0000945!6.52e-13!24;CL:0000826!6.52e-13!24;CL:0000236!1.17e-10!14;CL:0000723!4.78e-07!436;CL:0000048!5.61e-07!430 | |ontology_enrichment_celltype=CL:0000037!1.45e-48!172;CL:0000566!1.45e-48!172;CL:0000738!6.22e-48!140;CL:0000988!1.04e-45!182;CL:0002032!1.31e-45!165;CL:0000837!1.31e-45!165;CL:0002031!5.89e-42!124;CL:0002087!6.85e-42!119;CL:0000763!9.95e-29!112;CL:0000049!9.95e-29!112;CL:0000766!2.98e-28!76;CL:0000557!6.50e-27!71;CL:0000839!7.79e-27!70;CL:0000860!1.98e-26!45;CL:0002057!2.47e-26!42;CL:0002194!6.22e-25!63;CL:0000576!6.22e-25!63;CL:0000040!6.22e-25!63;CL:0000559!6.22e-25!63;CL:0002009!1.72e-24!65;CL:0000134!4.54e-16!358;CL:0000542!7.27e-15!53;CL:0000051!7.27e-15!53;CL:0000838!9.11e-15!52;CL:0002320!1.51e-14!365;CL:0000219!8.27e-14!390;CL:0000945!6.52e-13!24;CL:0000826!6.52e-13!24;CL:0000236!1.17e-10!14;CL:0000723!4.78e-07!436;CL:0000048!5.61e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.98e-46;33!CL:0002057;3.98e-46;33!CL:0000473;1.87e-40;39!CL:0000234;1.87e-40;39!CL:0000576;3.78e-34;48!CL:0000766;1.77e-28;69!CL:0000236;1.50e-24;13!CL:0002087;4.84e-19;104!CL:0000738;3.79e-18;136!CL:0000945;2.98e-17;24!CL:0000763;5.32e-16;100!CL:0000988;6.68e-12;177!CL:0000542;1.35e-11;53!CL:0000219;3.15e-08;193!CL:0002393;3.57e-07;6!CL:0002397;3.57e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;3.98e-46;33!CL:0002057;3.98e-46;33!CL:0000473;1.87e-40;39!CL:0000234;1.87e-40;39!CL:0000576;3.78e-34;48!CL:0000766;1.77e-28;69!CL:0000236;1.50e-24;13!CL:0002087;4.84e-19;104!CL:0000738;3.79e-18;136!CL:0000945;2.98e-17;24!CL:0000763;5.32e-16;100!CL:0000988;6.68e-12;177!CL:0000542;1.35e-11;53!CL:0000219;3.15e-08;193!CL:0002393;3.57e-07;6!CL:0002397;3.57e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.58e-74,136;CL:0000037,1.33e-70,168;CL:0002032,3.48e-67,161;CL:0000837,3.48e-67,161;CL:0002087,3.57e-66,115;CL:0000988,1.05e-65,177;CL:0002031,1.46e-64,120;CL:0000473,1.34e-63,48;CL:0000234,1.34e-63,48;CL:0000860,1.03e-61,42;CL:0002057,1.03e-61,42;CL:0000766,3.23e-56,72;CL:0000557,9.72e-54,67;CL:0002009,3.97e-50,61;CL:0002194,4.55e-50,59;CL:0000576,4.55e-50,59;CL:0000040,4.55e-50,59;CL:0000559,4.55e-50,59;CL:0000839,5.58e-50,66;CL:0000763,8.76e-50,108;CL:0000049,8.76e-50,108;CL:0000236,1.31e-22,14;CL:0000134,8.99e-22,354;CL:0002320,7.33e-21,361;CL:0000219,2.51e-18,386;CL:0000945,2.15e-17,24;CL:0000826,2.15e-17,24;CL:0000838,2.87e-15,52;CL:0000542,7.74e-15,53;CL:0000051,7.74e-15,53;CL:0000034,1.59e-14,441;CL:0000048,1.96e-14,427;CL:0000723,6.80e-14,433;CL:0002393,2.19e-11,9;CL:0002397,2.19e-11,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.85e-43;42!CL:0000049;7.48e-15;108!CL:0000051;1.35e-11;53 | |ontology_enrichment_development_v019=CL:0002057;9.85e-43;42!CL:0000049;7.48e-15;108!CL:0000051;1.35e-11;53 | ||
|ontology_enrichment_disease=DOID:2531!8.66e-07!51;DOID:0060083!8.66e-07!51 | |ontology_enrichment_disease=DOID:2531!8.66e-07!51;DOID:0060083!8.66e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.43e-29!102;UBERON:0003061!7.43e-29!102;UBERON:0002193!3.50e-27!112;UBERON:0002371!1.94e-24!80;UBERON:0001474!4.32e-24!86;UBERON:0004765!1.86e-21!101;UBERON:0001434!1.86e-21!101;UBERON:0002405!2.39e-21!115;UBERON:0002384!5.74e-14!375;UBERON:0003081!7.09e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!7.43e-29!102;UBERON:0003061!7.43e-29!102;UBERON:0002193!3.50e-27!112;UBERON:0002371!1.94e-24!80;UBERON:0001474!4.32e-24!86;UBERON:0004765!1.86e-21!101;UBERON:0001434!1.86e-21!101;UBERON:0002405!2.39e-21!115;UBERON:0002384!5.74e-14!375;UBERON:0003081!7.09e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-47,76;UBERON:0002390,6.98e-45,98;UBERON:0003061,6.98e-45,98;UBERON:0001474,5.82e-43,82;UBERON:0002405,3.23e-41,93;UBERON:0002193,9.01e-41,108;UBERON:0004765,9.73e-38,90;UBERON:0001434,2.14e-32,100;UBERON:0002384,2.25e-20,371;UBERON:0003081,3.16e-15,203;UBERON:0002204,3.36e-14,167 | |||
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| ||
|short_description=p6@RB1 | |short_description=p6@RB1 | ||
}} | }} |
Latest revision as of 15:16, 17 September 2015
Short description: | p6@RB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_ENST00000267163, ENST00000467505_5end |
EntrezGene: | RB1 |
HGNC: | 9884 |
UniProt: | P06400Q92728 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-47 | 76 |
hematopoietic system | 6.98e-45 | 98 |
blood island | 6.98e-45 | 98 |
bone element | 5.82e-43 | 82 |
immune system | 3.23e-41 | 93 |
hemolymphoid system | 9.01e-41 | 108 |
skeletal element | 9.73e-38 | 90 |
skeletal system | 2.14e-32 | 100 |
connective tissue | 2.25e-20 | 371 |
lateral plate mesoderm | 3.16e-15 | 203 |
musculoskeletal system | 3.36e-14 | 167 |