FFCP PHASE1:Hg19::chr1:6663197..6663214,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:6663197..6663214,+
|short_description=p@chr1:6663197..6663214,+
|description=CAGE_peak_at_chr1:6663197..6663214,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:6663197..6663214,+ | |||
|coexpression_cluster_id=C375 | |||
|description=CAGE_peak_at_chr1:6663197..6663214,+ | |||
|id=chr1:6663197..6663214,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.95e-13!42;CL:0000860!3.65e-12!45;CL:0002009!1.57e-08!65;CL:0002194!5.33e-08!63;CL:0000576!5.33e-08!63;CL:0000040!5.33e-08!63;CL:0000559!5.33e-08!63;CL:0000557!1.88e-07!71;CL:0000839!2.47e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.41e-08;39!CL:0000234;7.41e-08;39!CL:0000860;7.52e-08;33!CL:0002057;7.52e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.93e-09,48;CL:0000234,3.93e-09,48;CL:0000860,5.80e-08,42;CL:0002057,5.80e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.53e-22!115;UBERON:0001049!2.17e-10!57;UBERON:0005068!2.17e-10!57;UBERON:0006241!2.17e-10!57;UBERON:0007135!2.17e-10!57;UBERON:0003080!4.31e-10!42;UBERON:0002020!5.22e-10!34;UBERON:0003528!5.22e-10!34;UBERON:0002780!7.50e-10!41;UBERON:0001890!7.50e-10!41;UBERON:0006240!7.50e-10!41;UBERON:0002616!2.09e-09!59;UBERON:0002791!1.55e-08!33;UBERON:0001893!6.49e-08!34;UBERON:0001869!9.59e-08!32;UBERON:0002346!2.35e-07!90;UBERON:0002619!3.00e-07!22;UBERON:0003075!3.21e-07!86;UBERON:0007284!3.21e-07!86;UBERON:0000955!5.26e-07!69;UBERON:0006238!5.26e-07!69;UBERON:0001017!8.21e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.40e-13;34!UBERON:0002020;1.40e-13;34!UBERON:0002791;2.35e-13;32!UBERON:0002780;3.17e-13;41!UBERON:0001890;3.17e-13;41!UBERON:0001869;3.52e-12;32!UBERON:0002619;2.65e-11;22!UBERON:0001893;2.90e-11;34!UBERON:0000073;2.77e-10;53!UBERON:0002616;2.77e-10;53!UBERON:0000125;3.26e-10;9!UBERON:0002308;3.26e-10;9!UBERON:0000956;1.76e-09;25!UBERON:0000203;1.76e-09;25!UBERON:0001950;4.78e-09;20!UBERON:0002420;9.64e-08;9!UBERON:0007245;9.64e-08;9!UBERON:0010009;9.64e-08;9!UBERON:0010011;9.64e-08;9!UBERON:0000454;9.64e-08;9!UBERON:0001017;1.58e-07;75!UBERON:0009663;1.71e-07;7!UBERON:0007023;2.31e-07;114!UBERON:0000955;7.35e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.55e-26,114;UBERON:0001049,9.26e-20,56;UBERON:0005068,9.26e-20,56;UBERON:0006241,9.26e-20,56;UBERON:0007135,9.26e-20,56;UBERON:0000073,2.94e-18,53;UBERON:0002616,2.94e-18,53;UBERON:0002780,4.98e-17,41;UBERON:0001890,4.98e-17,41;UBERON:0003080,4.98e-17,41;UBERON:0006240,4.98e-17,41;UBERON:0003528,6.51e-17,34;UBERON:0002020,6.51e-17,34;UBERON:0003075,3.98e-16,82;UBERON:0007284,3.98e-16,82;UBERON:0002346,8.08e-15,86;UBERON:0002791,1.22e-14,32;UBERON:0000955,6.38e-14,68;UBERON:0006238,6.38e-14,68;UBERON:0001017,7.63e-14,81;UBERON:0001893,2.04e-13,34;UBERON:0001869,4.24e-13,32;UBERON:0010314,1.03e-12,132;UBERON:0010371,1.13e-12,104;UBERON:0001016,2.09e-12,89;UBERON:0002619,4.00e-11,22;UBERON:0003056,8.65e-11,61;UBERON:0000125,2.36e-10,9;UBERON:0002308,2.36e-10,9;UBERON:0000025,6.40e-10,192;UBERON:0004111,1.77e-09,240;UBERON:0000956,2.49e-09,25;UBERON:0000203,2.49e-09,25;UBERON:0001950,6.92e-09,20;UBERON:0002420,7.18e-08,9;UBERON:0007245,7.18e-08,9;UBERON:0010009,7.18e-08,9;UBERON:0010011,7.18e-08,9;UBERON:0000454,7.18e-08,9;UBERON:0002050,8.74e-08,564;UBERON:0009663,1.23e-07,7;UBERON:0000923,1.31e-07,560;UBERON:0010316,1.31e-07,560;UBERON:0005291,1.31e-07,560;UBERON:0006598,1.31e-07,560;UBERON:0010317,1.31e-07,560;UBERON:0002532,1.31e-07,560 | |||
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| ||
|short_description=p@chr1:6663197..6663214,+ | |||
}} | }} |
Latest revision as of 09:54, 28 July 2015
Short description: | p@chr1:6663197..6663214, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:6663197..6663214, + |
Coexpression cluster: | C375_optic_Cardiac_occipital_hippocampus_amygdala_heart_vagina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.93e-09 | 48 |
phagocyte | 3.93e-09 | 48 |
classical monocyte | 5.80e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.80e-08 | 42 |