FFCP PHASE1:Hg19::chr19:18899114..18899135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18899114..18899135,- | |||
|coexpression_cluster_id=C240 | |coexpression_cluster_id=C240 | ||
|description=CAGE_peak_at_chr19:18899114..18899135,- | |description=CAGE_peak_at_chr19:18899114..18899135,- | ||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr19:18899114..18899135,- | |short_description=p@chr19:18899114..18899135,- | ||
}} | }} |
Latest revision as of 05:21, 26 July 2015
Short description: | p@chr19:18899114..18899135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18899114..18899135, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.63e-32 | 15 |
preadipocyte | 1.48e-30 | 12 |
GAG secreting cell | 5.46e-30 | 9 |
carbohydrate secreting cell | 5.46e-30 | 9 |
fibrocyte | 2.64e-24 | 3 |
tendon cell | 2.64e-24 | 3 |
preadipocyte of the breast | 3.09e-24 | 3 |
adipocyte of omentum tissue | 4.95e-24 | 3 |
omentum preadipocyte | 5.04e-23 | 3 |
stromal cell | 6.42e-21 | 28 |
chondroblast | 1.06e-20 | 6 |
chondrocyte | 1.06e-20 | 6 |
extracellular matrix secreting cell | 7.68e-18 | 15 |
adipocyte of breast | 3.87e-17 | 2 |
synovial cell | 5.16e-11 | 3 |
mesenchymal cell | 1.41e-09 | 354 |
connective tissue cell | 2.60e-09 | 361 |
perirenal preadipocyte | 3.88e-09 | 1 |
perirenal adipocyte cell | 4.19e-09 | 1 |
fibroblast | 1.47e-08 | 76 |
motile cell | 2.28e-08 | 386 |
multi fate stem cell | 3.27e-07 | 427 |
secretory cell | 3.71e-07 | 36 |
somatic stem cell | 4.73e-07 | 433 |
stem cell | 7.61e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.10e-45 | 6 |
peritoneum | 3.10e-45 | 6 |
abdominal cavity | 3.10e-45 | 6 |
visceral peritoneum | 3.10e-45 | 6 |
cavity lining | 2.20e-39 | 12 |
serous membrane | 2.20e-39 | 12 |
dense regular connective tissue | 2.64e-24 | 3 |
tendon | 2.64e-24 | 3 |
regular connective tissue | 2.64e-24 | 3 |
breast | 9.51e-20 | 10 |
chest | 6.08e-18 | 11 |
perirenal fat | 1.60e-16 | 2 |
stratified squamous epithelium | 5.16e-11 | 3 |
layer of synovial tissue | 5.16e-11 | 3 |
synovial joint | 5.16e-11 | 3 |
synovial membrane of synovial joint | 5.16e-11 | 3 |
connective tissue | 6.03e-09 | 371 |
adipose tissue | 6.85e-09 | 14 |
body cavity or lining | 7.15e-09 | 49 |
penis | 7.27e-09 | 1 |
intromittent organ | 7.27e-09 | 1 |
lateral plate mesenchyme | 7.27e-09 | 1 |
undifferentiated genital tubercle | 7.27e-09 | 1 |
somatopleure | 7.27e-09 | 1 |