FFCP PHASE1:Hg19::chr3:25509887..25509890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:25509887..25509890,+ | |||
|description=CAGE_peak_at_chr3:25509887..25509890,+ | |description=CAGE_peak_at_chr3:25509887..25509890,+ | ||
|id=chr3:25509887..25509890,+ | |id=chr3:25509887..25509890,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;4.05e-07;1 | |ontology_enrichment_celltype_v019=CL:0000319;4.05e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.18e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.92e-08;3!UBERON:0000358;4.05e-07;1 | |ontology_enrichment_development_v019=UBERON:0003056;3.92e-08;3!UBERON:0000358;4.05e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;3.31e-07;1!DOID:3030;4.05e-07;1 | |ontology_enrichment_disease_v019=DOID:3112;3.31e-07;1!DOID:3030;4.05e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,3.52e-07,1;DOID:3030,4.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-13!115;UBERON:0000073!1.12e-12!94;UBERON:0001016!1.12e-12!94;UBERON:0000119!4.34e-12!312;UBERON:0000483!8.83e-12!309;UBERON:0003056!9.61e-12!61;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0005743!4.01e-11!86;UBERON:0002346!1.02e-10!90;UBERON:0000955!5.21e-10!69;UBERON:0006238!5.21e-10!69;UBERON:0001017!5.60e-10!82;UBERON:0000481!1.42e-09!347;UBERON:0002780!2.21e-09!41;UBERON:0001890!2.21e-09!41;UBERON:0006240!2.21e-09!41;UBERON:0002616!2.49e-09!59;UBERON:0000153!5.37e-09!129;UBERON:0007811!5.37e-09!129;UBERON:0003080!5.91e-09!42;UBERON:0004121!1.04e-08!169;UBERON:0000477!1.18e-08!286;UBERON:0000033!1.19e-08!123;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0001893!7.77e-08!34;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0004111!1.79e-07!241;UBERON:0002791!2.08e-07!33;UBERON:0001869!2.70e-07!32;UBERON:0002020!3.12e-07!34;UBERON:0003528!3.12e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!3.50e-13!115;UBERON:0000073!1.12e-12!94;UBERON:0001016!1.12e-12!94;UBERON:0000119!4.34e-12!312;UBERON:0000483!8.83e-12!309;UBERON:0003056!9.61e-12!61;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0005743!4.01e-11!86;UBERON:0002346!1.02e-10!90;UBERON:0000955!5.21e-10!69;UBERON:0006238!5.21e-10!69;UBERON:0001017!5.60e-10!82;UBERON:0000481!1.42e-09!347;UBERON:0002780!2.21e-09!41;UBERON:0001890!2.21e-09!41;UBERON:0006240!2.21e-09!41;UBERON:0002616!2.49e-09!59;UBERON:0000153!5.37e-09!129;UBERON:0007811!5.37e-09!129;UBERON:0003080!5.91e-09!42;UBERON:0004121!1.04e-08!169;UBERON:0000477!1.18e-08!286;UBERON:0000033!1.19e-08!123;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0001893!7.77e-08!34;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0004111!1.79e-07!241;UBERON:0002791!2.08e-07!33;UBERON:0001869!2.70e-07!32;UBERON:0002020!3.12e-07!34;UBERON:0003528!3.12e-07!34 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,6.92e-09,6;UBERON:0005388,6.92e-09,6;UBERON:0001802,6.92e-09,6;UBERON:0001456,2.27e-08,22;UBERON:0000941,8.27e-07,1;UBERON:0001785,8.27e-07,1;UBERON:0002464,8.27e-07,1;UBERON:0004904,8.27e-07,1;UBERON:0001021,8.27e-07,1;UBERON:0003902,8.27e-07,1;UBERON:0005425,8.27e-07,1;UBERON:0002084,8.75e-07,1;UBERON:0002082,8.75e-07,1;UBERON:0010226,8.75e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.850813354476611,0.665188192387692,1.31752178539689,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0.550236083880135,0,0.516833518338658,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0.892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0.605429710579726,0,0,0,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0,0,0.717558542755448,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0.514703430895577,0,0,0,0,0,0,0,0.695582429850461,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.831883446123229,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0.256450125116389,1.64007322849853,0,0.9273691048295,0.27470839445503,0.660075999364704,0,0,0,0.193341436584244,0.462145851343933,0.921022048356777,0.275673144969061,0.859361958946189,1.0151168573996,0.255679882248303,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0,1.00187420719394,1.48863347743867,0.632758849437452,0.38126038784765,0,0,0,0.78494864019923,0.359744915166629,0.54907405947211,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,3.97790605528978,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0.828851746593443,0,0.102268682502155,0,0,0.269605053441981,1.25314822272926,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.508507300585533,0,0.344743373241465,0,0,0.885741385813839,1.08536794762867,0,0,0,0.219385397153973,0,0.139423744278603,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,1.08194319871046,0,0.353830258013357,0,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0,0,0.61214552326098,0.189559738885464,0,0.414752765588989,0,0.330991955875499,0,0,0,0,0,0,0,1.04836000945218,0,0,0.0730893170861856,0,0.581934098930517,0,0.225980740780532,0.137041924646751,0,0.253243183823515,0,0.240476460754601,0.426905989478705,0,0,0.229073192331831,0,0,0.124252535565433,0,0,0,1.83596791745379,0,0,0.136905378891993,0,0.859530882839914,0,0.558564802544508,0.458320848023367,0.717873024576814,0.199679000498991,0.858452096273142,0.223171457441873,0.806201669840715,0.360299883542404,1.16495949527454,0,0,0,0.492137407573744,0.169346664131569,0,0,0,0,0,0,0,0.364497339948148,0,0.788057072991982,0.524545881349981,0,0,0,0.714695326373367,1.32418394073086,0,0,0.864221491201268,0,1.19730191562487,0,0.170388021785422,0.906496732161005,0.146552233678082,0,0.387848869084652,0,0.855434189421647,0,0,1.72924735609633,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0.310482014706917,2.07522952404346,0.124980407962107,0.909894705249887,0,0,0.936669811613763,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0.318593534327405,0,0.310525913752519,0,0,1.5652351854352,0.150257608997218,1.52322084867518,0.406870733204662,0,0.429642228169954,0,1.19428766609585,0,0,0.336749488765919,0,0,0,0,0.680117776536817,0,0,1.79088841081487,0,0.657852148736121,0.353378291891762,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0,2.21195617878347,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0.218419276384028,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,0.449604575675217,0,0.159633859057151,0,0.504143392443436,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,1.1441462864015,0,1.19349733269765,0.150420656698515,0.40341013740704,0,0,3.27543835020193,0,0.405225507710368,0,0.620060389503552,0.317079050969534,3.28184885410932,1.09651553371436,0,0,0,0,0.672567444437648,1.21393120847326,0.91064876540519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| ||
|short_description=p@chr3:25509887..25509890,+ | |short_description=p@chr3:25509887..25509890,+ | ||
}} | }} |
Latest revision as of 20:14, 29 July 2015
Short description: | p@chr3:25509887..25509890, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:25509887..25509890, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
retina | 6.92e-09 | 6 |
photoreceptor array | 6.92e-09 | 6 |
posterior segment of eyeball | 6.92e-09 | 6 |
face | 2.27e-08 | 22 |
cranial nerve II | 8.27e-07 | 1 |
cranial nerve | 8.27e-07 | 1 |
nerve trunk | 8.27e-07 | 1 |
nerve connecting eye with brain | 8.27e-07 | 1 |
nerve | 8.27e-07 | 1 |
retinal neural layer | 8.27e-07 | 1 |
presumptive neural retina | 8.27e-07 | 1 |
heart left ventricle | 8.75e-07 | 1 |
cardiac ventricle | 8.75e-07 | 1 |
future cardiac ventricle | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.52e-07 | 1 |
mucinous adenocarcinoma | 4.18e-07 | 1 |