FFCP PHASE1:Hg19::chr10:8087237..8087255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:8087237..8087255,+ | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_at_chr10:8087237..8087255,+ | |description=CAGE_peak_at_chr10:8087237..8087255,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.09e-07!3;CL:0000066!1.65e-07!254 | |ontology_enrichment_celltype=CL:0002541!1.09e-07!3;CL:0000066!1.65e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.44e-09;5 | |ontology_enrichment_celltype_v019=CL:0000333;3.44e-09;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.93e-12;1 | |ontology_enrichment_development_v019=UBERON:0008425;2.93e-12;1 | ||
|ontology_enrichment_disease=DOID:0050687!1.96e-14!143;DOID:5093!1.72e-11!4;DOID:1612!1.72e-11!4;DOID:162!4.22e-11!235;DOID:169!9.96e-11!6;DOID:14566!1.26e-10!239;DOID:299!1.14e-09!25;DOID:3095!1.62e-09!22;DOID:2994!1.62e-09!22;DOID:171!9.94e-09!10 | |ontology_enrichment_disease=DOID:0050687!1.96e-14!143;DOID:5093!1.72e-11!4;DOID:1612!1.72e-11!4;DOID:162!4.22e-11!235;DOID:169!9.96e-11!6;DOID:14566!1.26e-10!239;DOID:299!1.14e-09!25;DOID:3095!1.62e-09!22;DOID:2994!1.62e-09!22;DOID:171!9.94e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:5093;7.42e-43;4!DOID:1612;7.42e-43;4!DOID:9119;3.85e-12;1!DOID:3095;6.91e-08;22!DOID:2994;6.91e-08;22!DOID:169;8.41e-08;6!DOID:299;5.12e-07;25 | |ontology_enrichment_disease_v019=DOID:5093;7.42e-43;4!DOID:1612;7.42e-43;4!DOID:9119;3.85e-12;1!DOID:3095;6.91e-08;22!DOID:2994;6.91e-08;22!DOID:169;8.41e-08;6!DOID:299;5.12e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.20e-42,4;DOID:1612,1.20e-42,4;DOID:9119,3.65e-12,1;DOID:0050687,7.28e-09,143;DOID:3095,6.19e-08,22;DOID:2994,6.19e-08,22;DOID:169,7.08e-08,6;DOID:299,5.59e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.25e-09!14;UBERON:0000158!1.25e-09!14;UBERON:0000013!1.23e-08!5;UBERON:0002410!1.23e-08!5;UBERON:0003124!1.91e-08!7;UBERON:0000476!1.09e-07!3;UBERON:0000920!1.09e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!1.25e-09!14;UBERON:0000158!1.25e-09!14;UBERON:0000013!1.23e-08!5;UBERON:0002410!1.23e-08!5;UBERON:0003124!1.91e-08!7;UBERON:0000476!1.09e-07!3;UBERON:0000920!1.09e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.33e-17;10!UBERON:0001443;8.33e-16;11!UBERON:0000996;1.19e-11;1!UBERON:0001301;1.19e-11;1!UBERON:0000013;3.44e-09;5!UBERON:0002410;3.44e-09;5!UBERON:0002294;6.78e-07;7!UBERON:0001173;6.78e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000310;2.33e-17;10!UBERON:0001443;8.33e-16;11!UBERON:0000996;1.19e-11;1!UBERON:0001301;1.19e-11;1!UBERON:0000013;3.44e-09;5!UBERON:0002410;3.44e-09;5!UBERON:0002294;6.78e-07;7!UBERON:0001173;6.78e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.82e-17,10;UBERON:0001443,9.90e-16,11;UBERON:0000996,7.76e-12,1;UBERON:0001301,1.63e-11,1;UBERON:0000013,2.80e-09,5;UBERON:0002410,2.80e-09,5;UBERON:0003124,9.10e-07,7 | |||
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| ||
|short_description=p@chr10:8087237..8087255,+ | |short_description=p@chr10:8087237..8087255,+ | ||
}} | }} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:8087237..8087255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8087237..8087255, + |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
breast | 2.82e-17 | 10 |
chest | 9.90e-16 | 11 |
vagina | 7.76e-12 | 1 |
epididymis | 1.63e-11 | 1 |
sympathetic nervous system | 2.80e-09 | 5 |
autonomic nervous system | 2.80e-09 | 5 |
chorion | 9.10e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.20e-42 | 4 |
breast cancer | 1.20e-42 | 4 |
acute myeloid leukemia | 3.65e-12 | 1 |
cell type cancer | 7.28e-09 | 143 |
germ cell and embryonal cancer | 6.19e-08 | 22 |
germ cell cancer | 6.19e-08 | 22 |
neuroendocrine tumor | 7.08e-08 | 6 |
adenocarcinoma | 5.59e-07 | 25 |