FFCP PHASE1:Hg19::chr19:36119929..36119974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79171 | |EntrezGene=79171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28117 | |HGNC=28117 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BTD8 | |UniProt=Q9BTD8 | ||
|association_with_transcript=-5bp_to_ENST00000262633,ENST00000360475,NM_024321,uc002oan.2,uc002oao.2,uc002oap.2,uc002oaq.2,uc010eef.2,uc010eeg.2,uc010xsx.1_5end | |association_with_transcript=-5bp_to_ENST00000262633,ENST00000360475,NM_024321,uc002oan.2,uc002oao.2,uc002oap.2,uc002oaq.2,uc010eef.2,uc010eeg.2,uc010xsx.1_5end | ||
|cluster_id=chr19:36119929..36119974,+ | |||
|description=CAGE_peak_1_at_RBM42_5end | |description=CAGE_peak_1_at_RBM42_5end | ||
|id=chr19:36119929..36119974,+ | |id=chr19:36119929..36119974,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.03e-21!679;CL:0000004!2.03e-21!679;CL:0000255!2.03e-21!679;CL:0000012!9.94e-21!682;CL:0000144!1.79e-15!625;CL:0000222!3.65e-15!119;CL:0002371!9.94e-15!591;CL:0000003!4.87e-14!722;CL:0000183!1.45e-12!59;CL:0000192!2.99e-10!42;CL:0000514!2.99e-10!42;CL:0000187!3.12e-10!54;CL:0000055!3.35e-10!180;CL:0000063!5.27e-10!578;CL:0000680!1.09e-09!57;CL:0000056!1.09e-09!57;CL:0000355!1.09e-09!57;CL:0000220!4.00e-09!246;CL:0002321!7.91e-09!248;CL:0000359!9.77e-09!32;CL:0000393!1.63e-07!60;CL:0000211!1.63e-07!60;CL:0000066!6.88e-07!254 | |ontology_enrichment_celltype=CL:0000548!2.03e-21!679;CL:0000004!2.03e-21!679;CL:0000255!2.03e-21!679;CL:0000012!9.94e-21!682;CL:0000144!1.79e-15!625;CL:0000222!3.65e-15!119;CL:0002371!9.94e-15!591;CL:0000003!4.87e-14!722;CL:0000183!1.45e-12!59;CL:0000192!2.99e-10!42;CL:0000514!2.99e-10!42;CL:0000187!3.12e-10!54;CL:0000055!3.35e-10!180;CL:0000063!5.27e-10!578;CL:0000680!1.09e-09!57;CL:0000056!1.09e-09!57;CL:0000355!1.09e-09!57;CL:0000220!4.00e-09!246;CL:0002321!7.91e-09!248;CL:0000359!9.77e-09!32;CL:0000393!1.63e-07!60;CL:0000211!1.63e-07!60;CL:0000066!6.88e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.52e-08;32!CL:0000192;8.15e-08;43 | |ontology_enrichment_celltype_v019=CL:0000359;2.52e-08;32!CL:0000192;8.15e-08;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.03e-16,121;CL:0000192,1.59e-10,43;CL:0000514,1.59e-10,43;CL:0000187,1.69e-10,55;CL:0000680,5.95e-10,58;CL:0000056,5.95e-10,58;CL:0000355,5.95e-10,58;CL:0002321,2.87e-09,250;CL:0000359,9.77e-09,32;CL:0000393,9.37e-08,61;CL:0000211,9.37e-08,61;CL:0000066,9.95e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;8.15e-08;43 | |ontology_enrichment_development_v019=CL:0000514;8.15e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.45e-12!448;UBERON:0004120!8.45e-12!448;UBERON:0006603!8.45e-12!448;UBERON:0004872!5.09e-11!84;UBERON:0001637!8.53e-11!42;UBERON:0003509!8.53e-11!42;UBERON:0004572!8.53e-11!42;UBERON:0003914!8.73e-11!118;UBERON:0003104!9.82e-11!238;UBERON:0009142!9.82e-11!238;UBERON:0004290!2.32e-10!70;UBERON:0002100!2.35e-10!216;UBERON:0000486!3.09e-10!82;UBERON:0005256!3.54e-10!143;UBERON:0001981!2.12e-09!60;UBERON:0007500!2.12e-09!60;UBERON:0004537!2.12e-09!60;UBERON:0006965!2.12e-09!60;UBERON:0000914!2.75e-09!83;UBERON:0002329!2.75e-09!83;UBERON:0003077!2.75e-09!83;UBERON:0003059!2.75e-09!83;UBERON:0007282!2.75e-09!83;UBERON:0009618!2.75e-09!83;UBERON:0007285!2.75e-09!83;UBERON:0001134!8.44e-09!61;UBERON:0002036!8.44e-09!61;UBERON:0003082!8.44e-09!61;UBERON:0000490!8.47e-09!138;UBERON:0000055!1.05e-08!69;UBERON:0002049!2.05e-08!79;UBERON:0007798!2.05e-08!79;UBERON:0002385!2.59e-08!63;UBERON:0001015!2.59e-08!63;UBERON:0000383!2.59e-08!63;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33;UBERON:0003081!3.96e-07!216 | |ontology_enrichment_uberon=UBERON:0000926!8.45e-12!448;UBERON:0004120!8.45e-12!448;UBERON:0006603!8.45e-12!448;UBERON:0004872!5.09e-11!84;UBERON:0001637!8.53e-11!42;UBERON:0003509!8.53e-11!42;UBERON:0004572!8.53e-11!42;UBERON:0003914!8.73e-11!118;UBERON:0003104!9.82e-11!238;UBERON:0009142!9.82e-11!238;UBERON:0004290!2.32e-10!70;UBERON:0002100!2.35e-10!216;UBERON:0000486!3.09e-10!82;UBERON:0005256!3.54e-10!143;UBERON:0001981!2.12e-09!60;UBERON:0007500!2.12e-09!60;UBERON:0004537!2.12e-09!60;UBERON:0006965!2.12e-09!60;UBERON:0000914!2.75e-09!83;UBERON:0002329!2.75e-09!83;UBERON:0003077!2.75e-09!83;UBERON:0003059!2.75e-09!83;UBERON:0007282!2.75e-09!83;UBERON:0009618!2.75e-09!83;UBERON:0007285!2.75e-09!83;UBERON:0001134!8.44e-09!61;UBERON:0002036!8.44e-09!61;UBERON:0003082!8.44e-09!61;UBERON:0000490!8.47e-09!138;UBERON:0000055!1.05e-08!69;UBERON:0002049!2.05e-08!79;UBERON:0007798!2.05e-08!79;UBERON:0002385!2.59e-08!63;UBERON:0001015!2.59e-08!63;UBERON:0000383!2.59e-08!63;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33;UBERON:0003081!3.96e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.34e-08;42!UBERON:0003509;7.34e-08;42!UBERON:0004572;7.34e-08;42!UBERON:0003914;2.93e-07;74!UBERON:0007500;3.92e-07;56!UBERON:0001981;3.92e-07;56!UBERON:0004537;3.92e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0001637;7.34e-08;42!UBERON:0003509;7.34e-08;42!UBERON:0004572;7.34e-08;42!UBERON:0003914;2.93e-07;74!UBERON:0007500;3.92e-07;56!UBERON:0001981;3.92e-07;56!UBERON:0004537;3.92e-07;56 | ||
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| ||
|short_description=p1@RBM42 | |short_description=p1@RBM42 | ||
}} | }} |
Latest revision as of 12:44, 17 September 2015
Short description: | p1@RBM42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBM42_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000262633, ENST00000360475, NM_024321, uc002oan.2, uc002oao.2, uc002oap.2, uc002oaq.2, uc010eef.2, uc010eeg.2, uc010xsx.1_5end |
EntrezGene: | RBM42 |
HGNC: | 28117 |
UniProt: | Q9BTD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.03e-16 | 121 |
smooth muscle cell | 1.59e-10 | 43 |
smooth muscle myoblast | 1.59e-10 | 43 |
muscle cell | 1.69e-10 | 55 |
muscle precursor cell | 5.95e-10 | 58 |
myoblast | 5.95e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.95e-10 | 58 |
embryonic cell | 2.87e-09 | 250 |
vascular associated smooth muscle cell | 9.77e-09 | 32 |
electrically responsive cell | 9.37e-08 | 61 |
electrically active cell | 9.37e-08 | 61 |
epithelial cell | 9.95e-07 | 253 |