FFCP PHASE1:Hg19::chr1:60314072..60314088,+: Difference between revisions
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|id=chr1:60314072..60314088,+
|short_description=p@chr1:60314072..60314088,+
|description=CAGE_peak_at_chr1:60314072..60314088,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:60314072..60314088,+ | |||
|coexpression_cluster_id=C415 | |||
|description=CAGE_peak_at_chr1:60314072..60314088,+ | |||
|id=chr1:60314072..60314088,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.78e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.74e-12;3 | |||
|ontology_enrichment_disease=DOID:305!3.29e-16!106;DOID:0050687!3.53e-16!143;DOID:3095!2.12e-14!22;DOID:2994!2.12e-14!22;DOID:162!2.02e-08!235;DOID:14566!4.85e-08!239;DOID:1324!4.56e-07!15;DOID:171!5.16e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;5.27e-53;10!DOID:3095;1.51e-24;22!DOID:2994;1.51e-24;22!DOID:4468;9.86e-18;2!DOID:169;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.03e-53,10;DOID:3095,1.34e-24,22;DOID:2994,1.34e-24,22;DOID:4468,1.27e-17,2;DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.33e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.77e-74;4!UBERON:0000923;1.77e-74;4!UBERON:0010316;1.77e-74;4!UBERON:0005291;1.77e-74;4!UBERON:0002050;8.15e-60;5!UBERON:0005423;8.15e-60;5!UBERON:0000013;6.78e-08;5!UBERON:0002410;6.78e-08;5!UBERON:0002037;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5;UBERON:0002037,8.97e-07,6;UBERON:0006215,8.97e-07,6 | |||
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| ||
|short_description=p@chr1:60314072..60314088,+ | |||
}} | }} |
Latest revision as of 09:27, 28 July 2015
Short description: | p@chr1:60314072..60314088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:60314072..60314088, + |
Coexpression cluster: | C415_neuroectodermal_eye_retina_thyroid_acute_adult_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.55e-08 | 5 |
autonomic nervous system | 6.55e-08 | 5 |
cerebellum | 8.97e-07 | 6 |
rhombic lip | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.03e-53 | 10 |
germ cell and embryonal cancer | 1.34e-24 | 22 |
germ cell cancer | 1.34e-24 | 22 |
clear cell adenocarcinoma | 1.27e-17 | 2 |
neuroendocrine tumor | 8.48e-07 | 6 |