FFCP PHASE1:Hg19::chr11:34937973..34938014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8050 | |EntrezGene=8050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21350 | |HGNC=21350 | ||
|TSSclassifier=strong | |||
|UniProt=O00330 | |UniProt=O00330 | ||
|association_with_transcript=-104bp_to_ENST00000227868_5end | |association_with_transcript=-104bp_to_ENST00000227868_5end | ||
|cluster_id=chr11:34937973..34938014,+ | |||
|description=CAGE_peak_2_at_PDHX_5end | |description=CAGE_peak_2_at_PDHX_5end | ||
|id=chr11:34937973..34938014,+ | |id=chr11:34937973..34938014,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.54e-16!172;CL:0000566!1.54e-16!172;CL:0000988!2.28e-14!182;CL:0002032!4.10e-14!165;CL:0000837!4.10e-14!165;CL:0002087!8.26e-14!119;CL:0000738!2.08e-13!140;CL:0002031!7.16e-13!124;CL:0000542!5.63e-11!53;CL:0000051!5.63e-11!53;CL:0000838!7.39e-11!52;CL:0000791!3.36e-09!18;CL:0000789!3.36e-09!18;CL:0002420!3.36e-09!18;CL:0002419!3.36e-09!18;CL:0000790!3.36e-09!18;CL:0000084!9.99e-09!25;CL:0000827!9.99e-09!25;CL:0000625!8.45e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.54e-16!172;CL:0000566!1.54e-16!172;CL:0000988!2.28e-14!182;CL:0002032!4.10e-14!165;CL:0000837!4.10e-14!165;CL:0002087!8.26e-14!119;CL:0000738!2.08e-13!140;CL:0002031!7.16e-13!124;CL:0000542!5.63e-11!53;CL:0000051!5.63e-11!53;CL:0000838!7.39e-11!52;CL:0000791!3.36e-09!18;CL:0000789!3.36e-09!18;CL:0002420!3.36e-09!18;CL:0002419!3.36e-09!18;CL:0000790!3.36e-09!18;CL:0000084!9.99e-09!25;CL:0000827!9.99e-09!25;CL:0000625!8.45e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.02e-10;25!CL:0000791;1.10e-10;18!CL:0000789;1.10e-10;18!CL:0002419;1.10e-10;18!CL:0000625;1.08e-08;11!CL:0000542;7.42e-07;53 | |ontology_enrichment_celltype_v019=CL:0000084;1.02e-10;25!CL:0000791;1.10e-10;18!CL:0000789;1.10e-10;18!CL:0002419;1.10e-10;18!CL:0000625;1.08e-08;11!CL:0000542;7.42e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.30e-14,168;CL:0000988,4.28e-13,177;CL:0002087,3.80e-12,115;CL:0000738,5.92e-12,136;CL:0002032,1.13e-11,161;CL:0000837,1.13e-11,161;CL:0000838,2.06e-11,52;CL:0002031,4.05e-11,120;CL:0000542,5.43e-11,53;CL:0000051,5.43e-11,53;CL:0000084,9.65e-11,25;CL:0000827,9.65e-11,25;CL:0000791,1.38e-10,18;CL:0000789,1.38e-10,18;CL:0002420,1.38e-10,18;CL:0002419,1.38e-10,18;CL:0000790,1.38e-10,18;CL:0000625,1.04e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-10;18!CL:0000051;7.42e-07;53 | |ontology_enrichment_development_v019=CL:0000790;1.10e-10;18!CL:0000051;7.42e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-17!115;UBERON:0001017!9.36e-13!82;UBERON:0001049!1.75e-12!57;UBERON:0005068!1.75e-12!57;UBERON:0006241!1.75e-12!57;UBERON:0007135!1.75e-12!57;UBERON:0005743!6.89e-12!86;UBERON:0002780!4.57e-11!41;UBERON:0001890!4.57e-11!41;UBERON:0006240!4.57e-11!41;UBERON:0000073!8.98e-11!94;UBERON:0001016!8.98e-11!94;UBERON:0003080!2.76e-10!42;UBERON:0002616!4.42e-10!59;UBERON:0001893!4.67e-10!34;UBERON:0002020!8.74e-10!34;UBERON:0003528!8.74e-10!34;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0002791!1.61e-09!33;UBERON:0001869!1.84e-09!32;UBERON:0001950!9.53e-09!20;UBERON:0002619!4.10e-08!22;UBERON:0000956!8.08e-07!25;UBERON:0000203!8.08e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!4.62e-17!115;UBERON:0001017!9.36e-13!82;UBERON:0001049!1.75e-12!57;UBERON:0005068!1.75e-12!57;UBERON:0006241!1.75e-12!57;UBERON:0007135!1.75e-12!57;UBERON:0005743!6.89e-12!86;UBERON:0002780!4.57e-11!41;UBERON:0001890!4.57e-11!41;UBERON:0006240!4.57e-11!41;UBERON:0000073!8.98e-11!94;UBERON:0001016!8.98e-11!94;UBERON:0003080!2.76e-10!42;UBERON:0002616!4.42e-10!59;UBERON:0001893!4.67e-10!34;UBERON:0002020!8.74e-10!34;UBERON:0003528!8.74e-10!34;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0002791!1.61e-09!33;UBERON:0001869!1.84e-09!32;UBERON:0001950!9.53e-09!20;UBERON:0002619!4.10e-08!22;UBERON:0000956!8.08e-07!25;UBERON:0000203!8.08e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.70e-11;34!UBERON:0003528;1.05e-10;34!UBERON:0002020;1.05e-10;34!UBERON:0001869;1.51e-10;32!UBERON:0002791;2.88e-10;32!UBERON:0001950;2.94e-10;20!UBERON:0002619;6.39e-10;22!UBERON:0002780;8.91e-10;41!UBERON:0001890;8.91e-10;41!UBERON:0000073;1.68e-08;53!UBERON:0002616;1.68e-08;53!UBERON:0000956;4.34e-08;25!UBERON:0000203;4.34e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0001893;7.70e-11;34!UBERON:0003528;1.05e-10;34!UBERON:0002020;1.05e-10;34!UBERON:0001869;1.51e-10;32!UBERON:0002791;2.88e-10;32!UBERON:0001950;2.94e-10;20!UBERON:0002619;6.39e-10;22!UBERON:0002780;8.91e-10;41!UBERON:0001890;8.91e-10;41!UBERON:0000073;1.68e-08;53!UBERON:0002616;1.68e-08;53!UBERON:0000956;4.34e-08;25!UBERON:0000203;4.34e-08;25 | ||
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| ||
|short_description=p2@PDHX | |short_description=p2@PDHX | ||
}} | }} |
Latest revision as of 18:11, 17 September 2015
Short description: | p2@PDHX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDHX_5end |
Coexpression cluster: | NA |
Association with transcript: | -104bp_to_ENST00000227868_5end |
EntrezGene: | PDHX |
HGNC: | 21350 |
UniProt: | O00330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.30e-14 | 168 |
hematopoietic cell | 4.28e-13 | 177 |
nongranular leukocyte | 3.80e-12 | 115 |
leukocyte | 5.92e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.13e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-11 | 161 |
lymphoid lineage restricted progenitor cell | 2.06e-11 | 52 |
hematopoietic lineage restricted progenitor cell | 4.05e-11 | 120 |
lymphocyte | 5.43e-11 | 53 |
common lymphoid progenitor | 5.43e-11 | 53 |
T cell | 9.65e-11 | 25 |
pro-T cell | 9.65e-11 | 25 |
mature alpha-beta T cell | 1.38e-10 | 18 |
alpha-beta T cell | 1.38e-10 | 18 |
immature T cell | 1.38e-10 | 18 |
mature T cell | 1.38e-10 | 18 |
immature alpha-beta T cell | 1.38e-10 | 18 |
CD8-positive, alpha-beta T cell | 1.04e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.72e-16 | 114 |
neural tube | 6.71e-16 | 56 |
neural rod | 6.71e-16 | 56 |
future spinal cord | 6.71e-16 | 56 |
neural keel | 6.71e-16 | 56 |
regional part of nervous system | 2.64e-15 | 53 |
regional part of brain | 2.64e-15 | 53 |
central nervous system | 1.15e-14 | 81 |
nervous system | 3.64e-13 | 89 |
regional part of forebrain | 7.31e-13 | 41 |
forebrain | 7.31e-13 | 41 |
anterior neural tube | 7.31e-13 | 41 |
future forebrain | 7.31e-13 | 41 |
telencephalon | 8.19e-13 | 34 |
brain grey matter | 2.02e-12 | 34 |
gray matter | 2.02e-12 | 34 |
cerebral hemisphere | 6.64e-12 | 32 |
regional part of telencephalon | 2.44e-11 | 32 |
brain | 2.52e-11 | 68 |
future brain | 2.52e-11 | 68 |
neocortex | 1.85e-10 | 20 |
regional part of cerebral cortex | 2.92e-10 | 22 |
neurectoderm | 7.85e-10 | 86 |
neural plate | 1.76e-09 | 82 |
presumptive neural plate | 1.76e-09 | 82 |
cerebral cortex | 2.24e-08 | 25 |
pallium | 2.24e-08 | 25 |
pre-chordal neural plate | 6.64e-07 | 61 |