FFCP PHASE1:Hg19::chr15:80309724..80309729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80309724..80309729,+ | |||
|coexpression_cluster_id=C78 | |coexpression_cluster_id=C78 | ||
|description=CAGE_peak_at_chr15:80309724..80309729,+ | |description=CAGE_peak_at_chr15:80309724..80309729,+ | ||
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|ontology_enrichment_celltype=CL:0000945!3.29e-40!24;CL:0000826!3.29e-40!24;CL:0000236!1.97e-23!14;CL:0000542!1.10e-19!53;CL:0000051!1.10e-19!53;CL:0000838!2.44e-18!52;CL:0002087!2.51e-08!119;CL:0000738!5.45e-08!140;CL:0000988!8.06e-08!182;CL:0002032!7.90e-07!165;CL:0000837!7.90e-07!165;CL:0000037!9.11e-07!172;CL:0000566!9.11e-07!172 | |ontology_enrichment_celltype=CL:0000945!3.29e-40!24;CL:0000826!3.29e-40!24;CL:0000236!1.97e-23!14;CL:0000542!1.10e-19!53;CL:0000051!1.10e-19!53;CL:0000838!2.44e-18!52;CL:0002087!2.51e-08!119;CL:0000738!5.45e-08!140;CL:0000988!8.06e-08!182;CL:0002032!7.90e-07!165;CL:0000837!7.90e-07!165;CL:0000037!9.11e-07!172;CL:0000566!9.11e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.49e-80;24!CL:0000236;2.50e-55;13!CL:0000542;3.53e-23;53!CL:0000946;8.00e-08;1!CL:0000786;8.00e-08;1 | |ontology_enrichment_celltype_v019=CL:0000945;6.49e-80;24!CL:0000236;2.50e-55;13!CL:0000542;3.53e-23;53!CL:0000946;8.00e-08;1!CL:0000786;8.00e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.93e-80,24;CL:0000826,5.93e-80,24;CL:0000236,2.01e-61,14;CL:0000542,4.04e-38,53;CL:0000051,4.04e-38,53;CL:0000838,6.85e-35,52;CL:0002087,2.96e-15,115;CL:0000738,8.16e-14,136;CL:0000988,1.37e-13,177;CL:0002031,7.70e-13,120;CL:0002032,4.82e-11,161;CL:0000837,4.82e-11,161;CL:0000037,2.05e-10,168;CL:0000946,8.00e-08,1;CL:0000786,8.00e-08,1;CL:0000980,8.00e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.53e-23;53!UBERON:0001045;2.66e-07;1 | |ontology_enrichment_development_v019=CL:0000051;3.53e-23;53!UBERON:0001045;2.66e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.25e-07;1!DOID:0050177;1.25e-07;1!DOID:0050427;1.25e-07;1!DOID:12603;4.08e-07;1 | |ontology_enrichment_disease_v019=DOID:630;1.25e-07;1!DOID:0050177;1.25e-07;1!DOID:0050427;1.25e-07;1!DOID:12603;4.08e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.25e-07,1;DOID:0050177,1.25e-07,1;DOID:0050427,1.25e-07,1;DOID:12603,4.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.37e-16!15;UBERON:0000179!2.37e-16!15;UBERON:0000463!2.37e-16!15;UBERON:0002106!3.67e-07!3;UBERON:0004854!3.67e-07!3;UBERON:0009034!3.67e-07!3;UBERON:0002095!3.67e-07!3;UBERON:0004782!3.67e-07!3;UBERON:0003281!3.67e-07!3;UBERON:0009664!3.67e-07!3;UBERON:0002296!3.67e-07!3;UBERON:0005602!3.67e-07!3;UBERON:0001179!3.67e-07!3;UBERON:0006293!3.67e-07!3 | |ontology_enrichment_uberon=UBERON:0000178!2.37e-16!15;UBERON:0000179!2.37e-16!15;UBERON:0000463!2.37e-16!15;UBERON:0002106!3.67e-07!3;UBERON:0004854!3.67e-07!3;UBERON:0009034!3.67e-07!3;UBERON:0002095!3.67e-07!3;UBERON:0004782!3.67e-07!3;UBERON:0003281!3.67e-07!3;UBERON:0009664!3.67e-07!3;UBERON:0002296!3.67e-07!3;UBERON:0005602!3.67e-07!3;UBERON:0001179!3.67e-07!3;UBERON:0006293!3.67e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.30e-14;15!UBERON:0000179;7.30e-14;15!UBERON:0000463;7.30e-14;15!UBERON:0002390;1.87e-10;32!UBERON:0002106;1.13e-08;3!UBERON:0002193;9.14e-08;42!UBERON:0002372;1.83e-07;1!UBERON:0001961;1.83e-07;1!UBERON:0001744;1.83e-07;1!UBERON:0001042;1.83e-07;1!UBERON:0001735;1.83e-07;1!UBERON:0001154;2.66e-07;1!UBERON:0001153;2.66e-07;1!UBERON:0009854;2.66e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.30e-14;15!UBERON:0000179;7.30e-14;15!UBERON:0000463;7.30e-14;15!UBERON:0002390;1.87e-10;32!UBERON:0002106;1.13e-08;3!UBERON:0002193;9.14e-08;42!UBERON:0002372;1.83e-07;1!UBERON:0001961;1.83e-07;1!UBERON:0001744;1.83e-07;1!UBERON:0001042;1.83e-07;1!UBERON:0001735;1.83e-07;1!UBERON:0001154;2.66e-07;1!UBERON:0001153;2.66e-07;1!UBERON:0009854;2.66e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.83e-14,15;UBERON:0000179,7.83e-14,15;UBERON:0000463,7.83e-14,15;UBERON:0002106,9.66e-09,3;UBERON:0004854,9.66e-09,3;UBERON:0009034,9.66e-09,3;UBERON:0002095,9.66e-09,3;UBERON:0004782,9.66e-09,3;UBERON:0003281,9.66e-09,3;UBERON:0009664,9.66e-09,3;UBERON:0002296,9.66e-09,3;UBERON:0005602,9.66e-09,3;UBERON:0001179,9.66e-09,3;UBERON:0006293,9.66e-09,3;UBERON:0002372,1.83e-07,1;UBERON:0001961,1.83e-07,1;UBERON:0001744,1.83e-07,1;UBERON:0001735,1.83e-07,1;UBERON:0001154,2.50e-07,1;UBERON:0001153,2.50e-07,1;UBERON:0001045,2.50e-07,1 | |||
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| ||
|short_description=p@chr15:80309724..80309729,+ | |short_description=p@chr15:80309724..80309729,+ | ||
}} | }} |
Latest revision as of 04:44, 25 July 2015
Short description: | p@chr15:80309724..80309729, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80309724..80309729, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.93e-80 | 24 |
pro-B cell | 5.93e-80 | 24 |
B cell | 2.01e-61 | 14 |
lymphocyte | 4.04e-38 | 53 |
common lymphoid progenitor | 4.04e-38 | 53 |
lymphoid lineage restricted progenitor cell | 6.85e-35 | 52 |
nongranular leukocyte | 2.96e-15 | 115 |
leukocyte | 8.16e-14 | 136 |
hematopoietic cell | 1.37e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 7.70e-13 | 120 |
hematopoietic oligopotent progenitor cell | 4.82e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.82e-11 | 161 |
hematopoietic stem cell | 2.05e-10 | 168 |
antibody secreting cell | 8.00e-08 | 1 |
plasma cell | 8.00e-08 | 1 |
plasmablast | 8.00e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 7.83e-14 | 15 |
haemolymphatic fluid | 7.83e-14 | 15 |
organism substance | 7.83e-14 | 15 |
spleen | 9.66e-09 | 3 |
gastrointestinal system mesentery | 9.66e-09 | 3 |
stomach region | 9.66e-09 | 3 |
mesentery | 9.66e-09 | 3 |
gastrointestinal system serosa | 9.66e-09 | 3 |
mesentery of stomach | 9.66e-09 | 3 |
gut mesentery | 9.66e-09 | 3 |
dorsal mesentery | 9.66e-09 | 3 |
dorsal mesogastrium | 9.66e-09 | 3 |
peritoneal cavity | 9.66e-09 | 3 |
spleen primordium | 9.66e-09 | 3 |
tonsil | 1.83e-07 | 1 |
mucosa-associated lymphoid tissue | 1.83e-07 | 1 |
lymphoid tissue | 1.83e-07 | 1 |
tonsillar ring | 1.83e-07 | 1 |
vermiform appendix | 2.50e-07 | 1 |
caecum | 2.50e-07 | 1 |
midgut | 2.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.25e-07 | 1 |
monogenic disease | 1.25e-07 | 1 |
xeroderma pigmentosum | 1.25e-07 | 1 |
acute leukemia | 4.34e-07 | 1 |