FFCP PHASE1:Hg19::chr11:3498268..3498309,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000382076,ENST00000545935_5end | |association_with_transcript=0bp_to_ENST00000382076,ENST00000545935_5end | ||
|cluster_id=chr11:3498268..3498309,- | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_1_at_ENST00000382076_5end,CAGE_peak_1_at_ENST00000545935_5end | |description=CAGE_peak_1_at_ENST00000382076_5end,CAGE_peak_1_at_ENST00000545935_5end | ||
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|ontology_enrichment_celltype=CL:0002076!9.22e-25!43;CL:0000223!8.38e-17!59;CL:0002251!7.30e-14!21;CL:0000066!1.09e-13!254;CL:0002368!3.29e-10!13;CL:0000622!1.04e-07!5;CL:0002159!9.72e-07!13 | |ontology_enrichment_celltype=CL:0002076!9.22e-25!43;CL:0000223!8.38e-17!59;CL:0002251!7.30e-14!21;CL:0000066!1.09e-13!254;CL:0002368!3.29e-10!13;CL:0000622!1.04e-07!5;CL:0002159!9.72e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.96e-08;2 | |ontology_enrichment_celltype_v019=CL:0000575;1.96e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.71e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.64e-08;2 | |ontology_enrichment_development_v019=UBERON:0007297;4.64e-08;2 | ||
|ontology_enrichment_disease=DOID:1749!1.58e-11!14;DOID:305!1.10e-07!106 | |ontology_enrichment_disease=DOID:1749!1.58e-11!14;DOID:305!1.10e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.50e-08;4!DOID:1612;1.50e-08;4 | |ontology_enrichment_disease_v019=DOID:5093;1.50e-08;4!DOID:1612;1.50e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.24e-08,4;DOID:1612,2.24e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.24e-23!169;UBERON:0000925!6.24e-23!169;UBERON:0006595!6.24e-23!169;UBERON:0001007!1.30e-18!155;UBERON:0001555!1.30e-18!155;UBERON:0007026!1.30e-18!155;UBERON:0001004!1.80e-16!72;UBERON:0004921!1.18e-14!129;UBERON:0004185!1.18e-14!129;UBERON:0000161!7.92e-14!35;UBERON:0000077!6.65e-13!130;UBERON:0005911!9.95e-13!82;UBERON:0000166!1.80e-11!21;UBERON:0005153!2.40e-10!37;UBERON:0001044!3.73e-10!6;UBERON:0003293!3.73e-10!6;UBERON:0003294!3.73e-10!6;UBERON:0010047!3.73e-10!6;UBERON:0000167!3.73e-10!6;UBERON:0001041!9.04e-10!98;UBERON:0000464!9.14e-10!104;UBERON:0003408!3.19e-09!10;UBERON:0005157!4.36e-09!51;UBERON:0000165!7.06e-09!28;UBERON:0000930!7.06e-09!28;UBERON:0002530!7.17e-09!59;UBERON:0000466!8.77e-09!126;UBERON:0000065!2.57e-08!53;UBERON:0005178!5.39e-08!34;UBERON:0002224!5.39e-08!34;UBERON:0005181!1.19e-07!35;UBERON:0007023!5.16e-07!115 | |ontology_enrichment_uberon=UBERON:0004119!6.24e-23!169;UBERON:0000925!6.24e-23!169;UBERON:0006595!6.24e-23!169;UBERON:0001007!1.30e-18!155;UBERON:0001555!1.30e-18!155;UBERON:0007026!1.30e-18!155;UBERON:0001004!1.80e-16!72;UBERON:0004921!1.18e-14!129;UBERON:0004185!1.18e-14!129;UBERON:0000161!7.92e-14!35;UBERON:0000077!6.65e-13!130;UBERON:0005911!9.95e-13!82;UBERON:0000166!1.80e-11!21;UBERON:0005153!2.40e-10!37;UBERON:0001044!3.73e-10!6;UBERON:0003293!3.73e-10!6;UBERON:0003294!3.73e-10!6;UBERON:0010047!3.73e-10!6;UBERON:0000167!3.73e-10!6;UBERON:0001041!9.04e-10!98;UBERON:0000464!9.14e-10!104;UBERON:0003408!3.19e-09!10;UBERON:0005157!4.36e-09!51;UBERON:0000165!7.06e-09!28;UBERON:0000930!7.06e-09!28;UBERON:0002530!7.17e-09!59;UBERON:0000466!8.77e-09!126;UBERON:0000065!2.57e-08!53;UBERON:0005178!5.39e-08!34;UBERON:0002224!5.39e-08!34;UBERON:0005181!1.19e-07!35;UBERON:0007023!5.16e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.04e-11;3!UBERON:0004054;1.04e-11;3!UBERON:0001044;9.82e-11;6!UBERON:0003293;9.82e-11;6!UBERON:0003294;9.82e-11;6!UBERON:0010047;9.82e-11;6!UBERON:0003408;9.82e-11;6!UBERON:0000167;9.82e-11;6!UBERON:0001041;2.33e-09;14!UBERON:0001829;3.61e-09;2!UBERON:0005904;6.88e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.04e-11;3!UBERON:0004054;1.04e-11;3!UBERON:0001044;9.82e-11;6!UBERON:0003293;9.82e-11;6!UBERON:0003294;9.82e-11;6!UBERON:0010047;9.82e-11;6!UBERON:0003408;9.82e-11;6!UBERON:0000167;9.82e-11;6!UBERON:0001041;2.33e-09;14!UBERON:0001829;3.61e-09;2!UBERON:0005904;6.88e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.21e-12,3;UBERON:0004054,3.21e-12,3;UBERON:0001044,9.21e-11,6;UBERON:0003293,9.21e-11,6;UBERON:0003294,9.21e-11,6;UBERON:0010047,9.21e-11,6;UBERON:0000167,9.21e-11,6;UBERON:0005904,2.88e-09,4;UBERON:0001829,3.50e-09,2;UBERON:0005157,2.00e-08,47;UBERON:0004119,3.83e-08,160;UBERON:0000925,3.83e-08,160;UBERON:0006595,3.83e-08,160;UBERON:0005153,9.45e-08,37;UBERON:0001007,1.05e-07,145;UBERON:0001555,1.05e-07,145;UBERON:0007026,1.05e-07,145;UBERON:0004921,1.67e-07,118;UBERON:0001004,9.56e-07,74 | |||
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| ||
|short_description=p1@ENST00000382076,p1@ENST00000545935 | |short_description=p1@ENST00000382076,p1@ENST00000545935 | ||
}} | }} |
Latest revision as of 21:46, 23 July 2015
Short description: | p1@ENST00000382076, p1@ENST00000545935 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000382076_5end, CAGE_peak_1_at_ENST00000545935_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000382076, ENST00000545935_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.71e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.21e-12 | 3 |
internal male genitalia | 3.21e-12 | 3 |
saliva-secreting gland | 9.21e-11 | 6 |
gland of oral region | 9.21e-11 | 6 |
gland of foregut | 9.21e-11 | 6 |
oral gland | 9.21e-11 | 6 |
oral cavity | 9.21e-11 | 6 |
duct of male reproductive system | 2.88e-09 | 4 |
major salivary gland | 3.50e-09 | 2 |
epithelial fold | 2.00e-08 | 47 |
endoderm-derived structure | 3.83e-08 | 160 |
endoderm | 3.83e-08 | 160 |
presumptive endoderm | 3.83e-08 | 160 |
epithelial bud | 9.45e-08 | 37 |
digestive system | 1.05e-07 | 145 |
digestive tract | 1.05e-07 | 145 |
primitive gut | 1.05e-07 | 145 |
subdivision of digestive tract | 1.67e-07 | 118 |
respiratory system | 9.56e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.24e-08 | 4 |
breast cancer | 2.24e-08 | 4 |