FFCP PHASE1:Hg19::chr20:3785275..3785289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:3785275..3785289,+ | |||
|description=CAGE_peak_at_chr20:3785275..3785289,+ | |description=CAGE_peak_at_chr20:3785275..3785289,+ | ||
|id=chr20:3785275..3785289,+ | |id=chr20:3785275..3785289,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;7.55e-07;1!CL:0002625;7.55e-07;1!CL:0000216;7.55e-07;1!CL:0002379;7.55e-07;1 | |ontology_enrichment_celltype_v019=CL:0000511;7.55e-07;1!CL:0002625;7.55e-07;1!CL:0000216;7.55e-07;1!CL:0002379;7.55e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.78e-07,1;CL:0002625,4.78e-07,1;CL:0000216,4.78e-07,1;CL:0002379,7.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;7.55e-07;1!UBERON:0003852;7.55e-07;1 | |ontology_enrichment_development_v019=UBERON:0003099;7.55e-07;1!UBERON:0003852;7.55e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;2.28e-07;1!DOID:3620;7.55e-07;1!DOID:3565;7.55e-07;1 | |ontology_enrichment_disease_v019=DOID:3112;2.28e-07;1!DOID:3620;7.55e-07;1!DOID:3565;7.55e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,2.22e-07,1;DOID:3620,7.57e-07,1;DOID:3565,7.57e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;7.55e-07;1!UBERON:0001343;7.55e-07;1!UBERON:0005705;7.55e-07;1!UBERON:0008193;7.55e-07;1!UBERON:0010912;7.55e-07;1!UBERON:0002514;7.55e-07;1!UBERON:0003457;7.55e-07;1!UBERON:0008907;7.55e-07;1!UBERON:0008001;7.55e-07;1!UBERON:0007213;7.55e-07;1!UBERON:0009891;7.55e-07;1!UBERON:0007914;7.55e-07;1!UBERON:0004910;7.55e-07;1!UBERON:0007375;7.55e-07;1!UBERON:0003323;7.55e-07;1!UBERON:0010258;7.55e-07;1!UBERON:0005253;7.55e-07;1!UBERON:0007842;7.55e-07;1!UBERON:0004813;7.55e-07;1!UBERON:0002397;7.55e-07;1!UBERON:0003113;7.55e-07;1!UBERON:0003277;7.55e-07;1!UBERON:0001709;7.55e-07;1!UBERON:0002244;7.55e-07;1!UBERON:0005620;7.55e-07;1!UBERON:0010364;7.55e-07;1!UBERON:0004288;7.55e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001136;7.55e-07;1!UBERON:0001343;7.55e-07;1!UBERON:0005705;7.55e-07;1!UBERON:0008193;7.55e-07;1!UBERON:0010912;7.55e-07;1!UBERON:0002514;7.55e-07;1!UBERON:0003457;7.55e-07;1!UBERON:0008907;7.55e-07;1!UBERON:0008001;7.55e-07;1!UBERON:0007213;7.55e-07;1!UBERON:0009891;7.55e-07;1!UBERON:0007914;7.55e-07;1!UBERON:0004910;7.55e-07;1!UBERON:0007375;7.55e-07;1!UBERON:0003323;7.55e-07;1!UBERON:0010258;7.55e-07;1!UBERON:0005253;7.55e-07;1!UBERON:0007842;7.55e-07;1!UBERON:0004813;7.55e-07;1!UBERON:0002397;7.55e-07;1!UBERON:0003113;7.55e-07;1!UBERON:0003277;7.55e-07;1!UBERON:0001709;7.55e-07;1!UBERON:0002244;7.55e-07;1!UBERON:0005620;7.55e-07;1!UBERON:0010364;7.55e-07;1!UBERON:0004288;7.55e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.78e-07,1;UBERON:0001343,4.78e-07,1;UBERON:0004910,4.78e-07,1;UBERON:0005154,4.78e-07,1;UBERON:0005295,4.78e-07,1;UBERON:0004813,4.78e-07,1;UBERON:0005297,4.78e-07,1;UBERON:0005294,4.78e-07,1;UBERON:0010141,4.78e-07,1;UBERON:0005891,4.78e-07,1 | |||
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| ||
|short_description=p@chr20:3785275..3785289,+ | |short_description=p@chr20:3785275..3785289,+ | ||
}} | }} |
Latest revision as of 13:57, 28 July 2015
Short description: | p@chr20:3785275..3785289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:3785275..3785289, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.78e-07 | 1 |
seminiferous tubule epithelial cell | 4.78e-07 | 1 |
Sertoli cell | 4.78e-07 | 1 |
meningothelial cell | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.78e-07 | 1 |
seminiferous tubule of testis | 4.78e-07 | 1 |
epithelium of male gonad | 4.78e-07 | 1 |
epithelial cord | 4.78e-07 | 1 |
sex cord | 4.78e-07 | 1 |
seminiferous tubule epithelium | 4.78e-07 | 1 |
testis sex cord | 4.78e-07 | 1 |
genital ridge | 4.78e-07 | 1 |
primitive sex cord of indifferent gonad | 4.78e-07 | 1 |
coelomic epithelium | 4.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.22e-07 | 1 |
central nervous system cancer | 7.57e-07 | 1 |
meningioma | 7.57e-07 | 1 |