FFCP PHASE1:Hg19::chr12:49212518..49212599,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=784 | |EntrezGene=784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1403 | |HGNC=1403 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWK1 | |UniProt=F8VWK1 | ||
|association_with_transcript=0bp_to_ENST00000548279,ENST00000550771_5end | |association_with_transcript=0bp_to_ENST00000548279,ENST00000550771_5end | ||
|cluster_id=chr12:49212518..49212599,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_CACNB3_5end | |description=CAGE_peak_3_at_CACNB3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.02e-08!180;CL:0002319!3.58e-08!25;CL:0000133!1.04e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.02e-08!180;CL:0002319!3.58e-08!25;CL:0000133!1.04e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.08e-12;25!CL:0000095;1.39e-07;17 | |ontology_enrichment_celltype_v019=CL:0002319;3.08e-12;25!CL:0000095;1.39e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.23e-12,25;CL:0000133,7.44e-10,59;CL:0000095,1.10e-07,17;CL:0000123,1.10e-07,17;CL:0000333,2.78e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.49e-08;82!UBERON:0006238;3.68e-07;10 | |ontology_enrichment_development_v019=UBERON:0006601;2.49e-08;82!UBERON:0006238;3.68e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@CACNB3 | |short_description=p3@CACNB3 | ||
}} | }} |
Latest revision as of 14:30, 18 September 2015
Short description: | p3@CACNB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CACNB3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000548279, ENST00000550771_5end |
EntrezGene: | CACNB3 |
HGNC: | 1403 |
UniProt: | F8VWK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.23e-12 | 25 |
neurectodermal cell | 7.44e-10 | 59 |
neuron associated cell | 1.10e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.10e-07 | 17 |
migratory neural crest cell | 2.78e-07 | 41 |