FFCP PHASE1:Hg19::chr1:52629146..52629156,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:52629146..52629156,-
|short_description=p1@ENST00000412785
|description=CAGE_peak_1_at_ENST00000412785_5end
|association_with_transcript=-448bp_to_ENST0000...") |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-448bp_to_ENST00000412785_5end | |||
|cluster_id=chr1:52629146..52629156,- | |||
|description=CAGE_peak_1_at_ENST00000412785_5end | |||
|id=chr1:52629146..52629156,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;7.48e-30;1!CL:1000600;7.48e-30;1!CL:0000346;9.90e-11;3!CL:1000428;9.90e-11;3!CL:0000236;9.94e-10;13!CL:0002559;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.48e-30,1;CL:1000600,7.48e-30,1;CL:0000346,9.90e-11,3;CL:1000428,9.90e-11,3;CL:0000236,4.56e-09,14;CL:0002559,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.48e-30;1!UBERON:0001256;7.48e-30;1!UBERON:0001259;7.48e-30;1!UBERON:0001255;1.15e-15;2!UBERON:0001556;1.15e-15;2!UBERON:0000412;9.90e-11;3!UBERON:0001992;9.90e-11;3!UBERON:0000365;4.79e-07;5!UBERON:0000945;6.04e-07;5!UBERON:0002073;6.04e-07;5!UBERON:0010039;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.48e-30,1;UBERON:0001256,7.48e-30,1;UBERON:0001259,7.48e-30,1;UBERON:0001255,1.15e-15,2;UBERON:0001556,1.15e-15,2;UBERON:0000412,9.90e-11,3;UBERON:0001992,9.90e-11,3;UBERON:0000365,4.79e-07,5;UBERON:0002073,6.04e-07,5;UBERON:0005086,6.04e-07,5 | |||
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| ||
|short_description=p1@ENST00000412785 | |||
}} | }} |
Latest revision as of 09:04, 28 July 2015
Short description: | p1@ENST00000412785 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412785_5end |
Coexpression cluster: | NA |
Association with transcript: | -448bp_to_ENST00000412785_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.48e-30 | 1 |
lower urinary tract cell | 7.48e-30 | 1 |
hair follicle dermal papilla cell | 9.90e-11 | 3 |
stem cell of epidermis | 9.90e-11 | 3 |
B cell | 4.56e-09 | 14 |
hair follicle cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.48e-30 | 1 |
wall of urinary bladder | 7.48e-30 | 1 |
mucosa of urinary bladder | 7.48e-30 | 1 |
urinary bladder | 1.15e-15 | 2 |
lower urinary tract | 1.15e-15 | 2 |
dermal papilla | 9.90e-11 | 3 |
papillary layer of dermis | 9.90e-11 | 3 |
urothelium | 4.79e-07 | 5 |
hair follicle | 6.04e-07 | 5 |
hair follicle placode | 6.04e-07 | 5 |