FFCP PHASE1:Hg19::chr12:70004575..70004590,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=376132 | |EntrezGene=376132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20264 | |HGNC=20264 | ||
|TSSclassifier=strong | |||
|UniProt=Q5BKY1,Q3KP57 | |UniProt=Q5BKY1,Q3KP57 | ||
|association_with_transcript=-37bp_to_AK123908,BC106893_5end | |association_with_transcript=-37bp_to_AK123908,BC106893_5end | ||
|cluster_id=chr12:70004575..70004590,- | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_4_at_LRRC10_5end | |description=CAGE_peak_4_at_LRRC10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.23e-66;1!UBERON:0004140;2.39e-66;1!UBERON:0005062;1.03e-17;4!UBERON:0007284;1.03e-17;4!UBERON:0004872;8.99e-11;7 | |ontology_enrichment_development_v019=UBERON:0010227;1.23e-66;1!UBERON:0004140;2.39e-66;1!UBERON:0005062;1.03e-17;4!UBERON:0007284;1.03e-17;4!UBERON:0004872;8.99e-11;7 | ||
|ontology_enrichment_disease=DOID:178!5.13e-23!1;DOID:326!5.13e-23!1;DOID:3978!5.13e-23!1;DOID:3394!5.13e-23!1;DOID:5844!5.13e-23!1;DOID:114!3.24e-12!2;DOID:1287!9.63e-07!4 | |ontology_enrichment_disease=DOID:178!5.13e-23!1;DOID:326!5.13e-23!1;DOID:3978!5.13e-23!1;DOID:3394!5.13e-23!1;DOID:5844!5.13e-23!1;DOID:114!3.24e-12!2;DOID:1287!9.63e-07!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.60e-40!27;UBERON:0004151!1.71e-30!3;UBERON:0003978!2.67e-30!3;UBERON:0009751!2.67e-30!3;UBERON:0000946!2.67e-30!3;UBERON:0002523!2.67e-30!3;UBERON:0005983!2.67e-30!3;UBERON:0002165!2.67e-30!3;UBERON:0002062!2.67e-30!3;UBERON:0007280!2.67e-30!3;UBERON:0002079!1.07e-23!1;UBERON:0002146!1.67e-23!1;UBERON:0005623!1.67e-23!1;UBERON:0002084!2.62e-23!1;UBERON:0002082!2.62e-23!1;UBERON:0004706!2.62e-23!1;UBERON:0000948!3.02e-23!24;UBERON:0005498!3.02e-23!24;UBERON:0004140!3.02e-23!24;UBERON:0009881!3.02e-23!24;UBERON:0004141!3.02e-23!24;UBERON:0003084!3.02e-23!24;UBERON:0007005!3.02e-23!24;UBERON:0004139!3.02e-23!24;UBERON:0004291!3.02e-23!24;UBERON:0002135!3.28e-23!1;UBERON:0003103!1.38e-15!69;UBERON:0002081!1.48e-12!2;UBERON:0002133!2.59e-12!2;UBERON:0007023!4.80e-12!115;UBERON:0000473!7.27e-12!8;UBERON:0001009!1.83e-09!113;UBERON:0003135!6.88e-09!11;UBERON:0002300!1.12e-08!3;UBERON:0002342!2.85e-07!14;UBERON:0005062!2.85e-07!14;UBERON:0004872!9.24e-07!84 | |ontology_enrichment_uberon=UBERON:0007100!8.60e-40!27;UBERON:0004151!1.71e-30!3;UBERON:0003978!2.67e-30!3;UBERON:0009751!2.67e-30!3;UBERON:0000946!2.67e-30!3;UBERON:0002523!2.67e-30!3;UBERON:0005983!2.67e-30!3;UBERON:0002165!2.67e-30!3;UBERON:0002062!2.67e-30!3;UBERON:0007280!2.67e-30!3;UBERON:0002079!1.07e-23!1;UBERON:0002146!1.67e-23!1;UBERON:0005623!1.67e-23!1;UBERON:0002084!2.62e-23!1;UBERON:0002082!2.62e-23!1;UBERON:0004706!2.62e-23!1;UBERON:0000948!3.02e-23!24;UBERON:0005498!3.02e-23!24;UBERON:0004140!3.02e-23!24;UBERON:0009881!3.02e-23!24;UBERON:0004141!3.02e-23!24;UBERON:0003084!3.02e-23!24;UBERON:0007005!3.02e-23!24;UBERON:0004139!3.02e-23!24;UBERON:0004291!3.02e-23!24;UBERON:0002135!3.28e-23!1;UBERON:0003103!1.38e-15!69;UBERON:0002081!1.48e-12!2;UBERON:0002133!2.59e-12!2;UBERON:0007023!4.80e-12!115;UBERON:0000473!7.27e-12!8;UBERON:0001009!1.83e-09!113;UBERON:0003135!6.88e-09!11;UBERON:0002300!1.12e-08!3;UBERON:0002342!2.85e-07!14;UBERON:0005062!2.85e-07!14;UBERON:0004872!9.24e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.23e-66;1!UBERON:0002146;4.66e-66;1!UBERON:0005623;4.66e-66;1!UBERON:0002081;3.61e-34;2!UBERON:0000948;7.08e-28;22!UBERON:0007100;1.10e-24;25!UBERON:0004151;2.62e-23;3!UBERON:0003978;4.09e-23;3!UBERON:0000946;4.09e-23;3!UBERON:0003103;8.51e-11;61!UBERON:0010313;6.56e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0002079;1.23e-66;1!UBERON:0002146;4.66e-66;1!UBERON:0005623;4.66e-66;1!UBERON:0002081;3.61e-34;2!UBERON:0000948;7.08e-28;22!UBERON:0007100;1.10e-24;25!UBERON:0004151;2.62e-23;3!UBERON:0003978;4.09e-23;3!UBERON:0000946;4.09e-23;3!UBERON:0003103;8.51e-11;61!UBERON:0010313;6.56e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.23e-66,1;UBERON:0002146,4.66e-66,1;UBERON:0005623,4.66e-66,1;UBERON:0002081,3.61e-34,2;UBERON:0010227,3.61e-34,2;UBERON:0000948,1.16e-25,24;UBERON:0005498,1.16e-25,24;UBERON:0004140,1.16e-25,24;UBERON:0009881,1.16e-25,24;UBERON:0004141,1.16e-25,24;UBERON:0003084,1.16e-25,24;UBERON:0007005,1.16e-25,24;UBERON:0004139,1.16e-25,24;UBERON:0004291,1.16e-25,24;UBERON:0004151,2.62e-23,3;UBERON:0003978,4.09e-23,3;UBERON:0009751,4.09e-23,3;UBERON:0000946,4.09e-23,3;UBERON:0002523,4.09e-23,3;UBERON:0005983,4.09e-23,3;UBERON:0002165,4.09e-23,3;UBERON:0002062,4.09e-23,3;UBERON:0007280,4.09e-23,3;UBERON:0007100,5.98e-23,27;UBERON:0004797,9.89e-11,7;UBERON:0003103,8.58e-10,68;UBERON:0004872,3.31e-08,83;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10 | |||
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|short_description=p4@LRRC10 | |short_description=p4@LRRC10 | ||
}} | }} |
Latest revision as of 06:34, 20 September 2015
Short description: | p4@LRRC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC10_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | -37bp_to_AK123908, BC106893_5end |
EntrezGene: | LRRC10 |
HGNC: | 20264 |
UniProt: | Q5BKY1Q3KP57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.23e-66 | 1 |
pulmonary valve | 4.66e-66 | 1 |
semi-lunar valve | 4.66e-66 | 1 |
cardiac atrium | 3.61e-34 | 2 |
future cardiac atrium | 3.61e-34 | 2 |
heart | 1.16e-25 | 24 |
primitive heart tube | 1.16e-25 | 24 |
primary heart field | 1.16e-25 | 24 |
anterior lateral plate mesoderm | 1.16e-25 | 24 |
heart tube | 1.16e-25 | 24 |
heart primordium | 1.16e-25 | 24 |
cardiac mesoderm | 1.16e-25 | 24 |
cardiogenic plate | 1.16e-25 | 24 |
heart rudiment | 1.16e-25 | 24 |
cardiac chamber | 2.62e-23 | 3 |
valve | 4.09e-23 | 3 |
cardiac mesenchyme | 4.09e-23 | 3 |
cardial valve | 4.09e-23 | 3 |
tunica intima | 4.09e-23 | 3 |
heart layer | 4.09e-23 | 3 |
endocardium | 4.09e-23 | 3 |
endocardial cushion | 4.09e-23 | 3 |
presumptive endocardium | 4.09e-23 | 3 |
primary circulatory organ | 5.98e-23 | 27 |
blood vessel layer | 9.89e-11 | 7 |
compound organ | 8.58e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |