FFCP PHASE1:Hg19::chrX:110513769..110513778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=827 | |EntrezGene=827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1483 | |HGNC=1483 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6Q1 | |UniProt=Q9Y6Q1 | ||
|association_with_transcript=0bp_to_NM_014289_5end | |association_with_transcript=0bp_to_NM_014289_5end | ||
|cluster_id=chrX:110513769..110513778,- | |||
|coexpression_cluster_id=C134 | |coexpression_cluster_id=C134 | ||
|description=CAGE_peak_5_at_CAPN6_5end | |description=CAGE_peak_5_at_CAPN6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!4.13e-07!3 | |ontology_enrichment_celltype=CL:0002541!4.13e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.62e-09;3 | |ontology_enrichment_celltype_v019=CL:0002541;2.62e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.30e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.97e-08;1 | |ontology_enrichment_development_v019=UBERON:0003124;6.97e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;1.35e-07;1!DOID:0070004;1.35e-07;1 | |ontology_enrichment_disease_v019=DOID:4960;1.35e-07;1!DOID:0070004;1.35e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,1.44e-07,1;DOID:0070004,1.44e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.24e-10!35;UBERON:0000059!8.09e-08!11;UBERON:0000476!4.13e-07!3;UBERON:0000920!4.13e-07!3;UBERON:0001155!5.18e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!5.24e-10!35;UBERON:0000059!8.09e-08!11;UBERON:0000476!4.13e-07!3;UBERON:0000920!4.13e-07!3;UBERON:0001155!5.18e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.81e-14;49!UBERON:0003124;2.62e-09;3!UBERON:0000920;2.62e-09;3!UBERON:0005795;3.31e-08;1!UBERON:0002426;3.31e-08;1!UBERON:0003831;3.31e-08;1!UBERON:0003898;3.31e-08;1!UBERON:0004830;3.31e-08;1!UBERON:0003830;3.31e-08;1!UBERON:0005175;3.31e-08;1!UBERON:0001774;3.31e-08;1!UBERON:0001103;3.31e-08;1!UBERON:0001301;4.82e-08;1!UBERON:0007029;6.97e-08;1!UBERON:0006834;1.35e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000922;2.81e-14;49!UBERON:0003124;2.62e-09;3!UBERON:0000920;2.62e-09;3!UBERON:0005795;3.31e-08;1!UBERON:0002426;3.31e-08;1!UBERON:0003831;3.31e-08;1!UBERON:0003898;3.31e-08;1!UBERON:0004830;3.31e-08;1!UBERON:0003830;3.31e-08;1!UBERON:0005175;3.31e-08;1!UBERON:0001774;3.31e-08;1!UBERON:0001103;3.31e-08;1!UBERON:0001301;4.82e-08;1!UBERON:0007029;6.97e-08;1!UBERON:0006834;1.35e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.30e-09,3;UBERON:0003124,8.84e-09,7;UBERON:0002426,3.55e-08,1;UBERON:0003831,3.55e-08,1;UBERON:0003898,3.55e-08,1;UBERON:0004830,3.55e-08,1;UBERON:0003830,3.55e-08,1;UBERON:0005175,3.55e-08,1;UBERON:0001774,3.55e-08,1;UBERON:0001103,3.55e-08,1;UBERON:0010084,3.55e-08,1;UBERON:0001301,5.33e-08,1;UBERON:0007029,6.10e-08,1;UBERON:0006834,1.54e-07,1;UBERON:0005631,1.68e-07,14;UBERON:0000158,1.68e-07,14 | |||
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| ||
|short_description=p5@CAPN6 | |short_description=p5@CAPN6 | ||
}} | }} |
Latest revision as of 01:36, 19 September 2015
Short description: | p5@CAPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAPN6_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 0bp_to_NM_014289_5end |
EntrezGene: | CAPN6 |
HGNC: | 1483 |
UniProt: | Q9Y6Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.30e-09 | 3 |
chorion | 8.84e-09 | 7 |
chest muscle | 3.55e-08 | 1 |
respiratory system muscle | 3.55e-08 | 1 |
skeletal muscle of trunk | 3.55e-08 | 1 |
respiratory system skeletal muscle | 3.55e-08 | 1 |
thoracic segment muscle | 3.55e-08 | 1 |
chest organ | 3.55e-08 | 1 |
muscle of trunk | 3.55e-08 | 1 |
diaphragm | 3.55e-08 | 1 |
future diaphragm | 3.55e-08 | 1 |
epididymis | 5.33e-08 | 1 |
surface | 6.10e-08 | 1 |
uterus or analog | 1.54e-07 | 1 |
extraembryonic membrane | 1.68e-07 | 14 |
membranous layer | 1.68e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.44e-07 | 1 |
myeloma | 1.44e-07 | 1 |