FFCP PHASE1:Hg19::chr13:38143481..38143491,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38143481..38143491,- | |||
|coexpression_cluster_id=C231 | |coexpression_cluster_id=C231 | ||
|description=CAGE_peak_at_chr13:38143481..38143491,- | |description=CAGE_peak_at_chr13:38143481..38143491,- | ||
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|ontology_enrichment_celltype=CL:0002334!2.32e-18!12;CL:0000057!9.20e-11!75;CL:0002579!7.55e-10!3;CL:0002580!1.55e-09!3;CL:0000077!2.22e-09!19;CL:0000594!1.21e-08!3;CL:0000197!5.85e-08!6;CL:0000098!5.85e-08!6;CL:0002167!5.85e-08!6;CL:0000055!7.91e-08!180 | |ontology_enrichment_celltype=CL:0002334!2.32e-18!12;CL:0000057!9.20e-11!75;CL:0002579!7.55e-10!3;CL:0002580!1.55e-09!3;CL:0000077!2.22e-09!19;CL:0000594!1.21e-08!3;CL:0000197!5.85e-08!6;CL:0000098!5.85e-08!6;CL:0002167!5.85e-08!6;CL:0000055!7.91e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.57e-09;4!CL:0002547;1.57e-09;4!CL:0000077;5.25e-08;19!CL:0002569;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:1000306;1.57e-09;4!CL:0002547;1.57e-09;4!CL:0000077;5.25e-08;19!CL:0002569;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.57e-09,4;CL:0002547,1.57e-09,4;CL:0000077,5.16e-08,19;CL:0002569,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.57e-09;4!UBERON:0000415;1.57e-09;4!UBERON:0007240;1.57e-09;4!UBERON:0005742;1.57e-09;4!UBERON:0005734;1.57e-09;4!UBERON:0004664;1.57e-09;4!UBERON:0004663;1.57e-09;4!UBERON:0003422;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004797;1.57e-09;4!UBERON:0000415;1.57e-09;4!UBERON:0007240;1.57e-09;4!UBERON:0005742;1.57e-09;4!UBERON:0005734;1.57e-09;4!UBERON:0004664;1.57e-09;4!UBERON:0004663;1.57e-09;4!UBERON:0003422;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.57e-09,4;UBERON:0007240,1.57e-09,4;UBERON:0005742,1.57e-09,4;UBERON:0005734,1.57e-09,4;UBERON:0004664,1.57e-09,4;UBERON:0004663,1.57e-09,4;UBERON:0003422,8.48e-07,6 | |||
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| ||
|short_description=p@chr13:38143481..38143491,- | |short_description=p@chr13:38143481..38143491,- | ||
}} | }} |
Latest revision as of 15:52, 24 July 2015
Short description: | p@chr13:38143481..38143491, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38143481..38143491, - |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.57e-09 | 4 |
fibroblast of the aortic adventitia | 1.57e-09 | 4 |
mesothelial cell | 5.16e-08 | 19 |
mesenchymal stem cell of umbilical cord | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.57e-09 | 4 |
tunica adventitia of artery | 1.57e-09 | 4 |
adventitia | 1.57e-09 | 4 |
tunica adventitia of blood vessel | 1.57e-09 | 4 |
aorta tunica adventitia | 1.57e-09 | 4 |
aorta wall | 1.57e-09 | 4 |
mesenchyme of umbilical cord | 8.48e-07 | 6 |